Protein–RNA interactions for Protein: Q9GZM3

POLR2J2, DNA-directed RNA polymerase II subunit RPB11-b1, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2Q9GZM3 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
POLR2J2Q9GZM3 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
POLR2J2Q9GZM3 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
POLR2J2Q9GZM3 CSNK1G3-201ENST00000345990 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
POLR2J2Q9GZM3 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
POLR2J2Q9GZM3 RASA4-203ENST00000461209 3244 ntTSL 2 BASIC12.88□□□□□ -0.35
POLR2J2Q9GZM3 PDE2A-218ENST00000540345 3027 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
POLR2J2Q9GZM3 AC102953.2-201ENST00000609755 3026 ntBASIC12.88□□□□□ -0.35
POLR2J2Q9GZM3 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
POLR2J2Q9GZM3 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
POLR2J2Q9GZM3 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
POLR2J2Q9GZM3 INCENP-201ENST00000278849 3698 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
POLR2J2Q9GZM3 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
POLR2J2Q9GZM3 PPP6C-203ENST00000451402 4349 ntTSL 2 BASIC12.87□□□□□ -0.35
POLR2J2Q9GZM3 MAP7D2-202ENST00000379651 3930 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
POLR2J2Q9GZM3 RC3H2-205ENST00000423239 3623 ntTSL 5 BASIC12.87□□□□□ -0.35
POLR2J2Q9GZM3 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC12.87□□□□□ -0.35
POLR2J2Q9GZM3 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
POLR2J2Q9GZM3 IFT172-203ENST00000416524 1982 ntTSL 2 BASIC12.87□□□□□ -0.35
POLR2J2Q9GZM3 CCDC18-203ENST00000401026 4552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
POLR2J2Q9GZM3 GRIA4-201ENST00000282499 5508 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
POLR2J2Q9GZM3 RBP3-201ENST00000584701 4276 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
POLR2J2Q9GZM3 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
POLR2J2Q9GZM3 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
POLR2J2Q9GZM3 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
POLR2J2Q9GZM3 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
POLR2J2Q9GZM3 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
POLR2J2Q9GZM3 TLR6-202ENST00000436693 5880 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
POLR2J2Q9GZM3 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC12.87□□□□□ -0.35
POLR2J2Q9GZM3 AF013593.1-201ENST00000458074 1487 ntBASIC12.87□□□□□ -0.35
POLR2J2Q9GZM3 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
POLR2J2Q9GZM3 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
POLR2J2Q9GZM3 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
POLR2J2Q9GZM3 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC12.87□□□□□ -0.35
POLR2J2Q9GZM3 BAX-205ENST00000391871 687 ntTSL 5 BASIC12.87□□□□□ -0.35
POLR2J2Q9GZM3 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC12.87□□□□□ -0.35
POLR2J2Q9GZM3 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC12.87□□□□□ -0.35
POLR2J2Q9GZM3 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
POLR2J2Q9GZM3 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
POLR2J2Q9GZM3 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
POLR2J2Q9GZM3 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC12.87□□□□□ -0.35
POLR2J2Q9GZM3 COX20P2-201ENST00000452636 358 ntBASIC12.87□□□□□ -0.35
POLR2J2Q9GZM3 RNMTL1P1-201ENST00000454103 560 ntBASIC12.87□□□□□ -0.35
POLR2J2Q9GZM3 ACA64.2-201ENST00000459014 129 ntBASIC12.87□□□□□ -0.35
POLR2J2Q9GZM3 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC12.87□□□□□ -0.35
POLR2J2Q9GZM3 AC106794.1-201ENST00000506935 792 ntBASIC12.87□□□□□ -0.35
POLR2J2Q9GZM3 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC12.87□□□□□ -0.35
POLR2J2Q9GZM3 CD74-212ENST00000524315 584 ntTSL 5 BASIC12.87□□□□□ -0.35
POLR2J2Q9GZM3 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC12.87□□□□□ -0.35
POLR2J2Q9GZM3 AC005730.2-201ENST00000564549 1184 ntBASIC12.87□□□□□ -0.35
POLR2J2Q9GZM3 MIR3615-201ENST00000581999 87 ntBASIC12.87□□□□□ -0.35
POLR2J2Q9GZM3 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC12.87□□□□□ -0.35
POLR2J2Q9GZM3 AC010328.2-201ENST00000597698 1111 ntBASIC12.87□□□□□ -0.35
POLR2J2Q9GZM3 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
POLR2J2Q9GZM3 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
POLR2J2Q9GZM3 AC022748.3-201ENST00000621828 275 ntBASIC12.87□□□□□ -0.35
POLR2J2Q9GZM3 AC068587.8-201ENST00000641239 219 ntBASIC12.87□□□□□ -0.35
POLR2J2Q9GZM3 AC004923.1-202ENST00000642106 209 ntBASIC12.87□□□□□ -0.35
POLR2J2Q9GZM3 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
POLR2J2Q9GZM3 DYRK4-201ENST00000010132 1840 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
POLR2J2Q9GZM3 DAB1-207ENST00000420954 1817 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
POLR2J2Q9GZM3 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
POLR2J2Q9GZM3 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC12.87□□□□□ -0.35
POLR2J2Q9GZM3 CCDC13-201ENST00000310232 2943 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
POLR2J2Q9GZM3 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC12.87□□□□□ -0.35
POLR2J2Q9GZM3 NOBOX-201ENST00000467773 2076 ntTSL 5 BASIC12.87□□□□□ -0.35
POLR2J2Q9GZM3 CDH8-201ENST00000299345 3728 ntTSL 5 BASIC12.87□□□□□ -0.35
POLR2J2Q9GZM3 AL645937.6-201ENST00000641122 3727 ntBASIC12.87□□□□□ -0.35
POLR2J2Q9GZM3 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC12.87□□□□□ -0.35
POLR2J2Q9GZM3 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
POLR2J2Q9GZM3 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
POLR2J2Q9GZM3 VILL-201ENST00000283713 2970 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
POLR2J2Q9GZM3 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
POLR2J2Q9GZM3 BCCIP-202ENST00000299130 2337 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
POLR2J2Q9GZM3 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC12.87□□□□□ -0.35
POLR2J2Q9GZM3 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
POLR2J2Q9GZM3 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
POLR2J2Q9GZM3 EIF3C-201ENST00000331666 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
POLR2J2Q9GZM3 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC12.86□□□□□ -0.35
POLR2J2Q9GZM3 TRAPPC9-201ENST00000389328 4474 ntTSL 2 BASIC12.86□□□□□ -0.35
POLR2J2Q9GZM3 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
POLR2J2Q9GZM3 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
POLR2J2Q9GZM3 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
POLR2J2Q9GZM3 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC12.86□□□□□ -0.35
POLR2J2Q9GZM3 AAR2-203ENST00000397286 1466 ntTSL 5 BASIC12.86□□□□□ -0.35
POLR2J2Q9GZM3 AC004554.1-201ENST00000422830 1468 ntBASIC12.86□□□□□ -0.35
POLR2J2Q9GZM3 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
POLR2J2Q9GZM3 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
POLR2J2Q9GZM3 EFEMP1-201ENST00000355426 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
POLR2J2Q9GZM3 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC12.86□□□□□ -0.35
POLR2J2Q9GZM3 AC002350.2-201ENST00000623894 1828 ntBASIC12.86□□□□□ -0.35
POLR2J2Q9GZM3 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
POLR2J2Q9GZM3 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC12.86□□□□□ -0.35
POLR2J2Q9GZM3 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC12.86□□□□□ -0.35
POLR2J2Q9GZM3 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
POLR2J2Q9GZM3 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
POLR2J2Q9GZM3 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
POLR2J2Q9GZM3 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC12.86□□□□□ -0.35
POLR2J2Q9GZM3 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
POLR2J2Q9GZM3 SMS-201ENST00000379404 1174 ntTSL 3 BASIC12.86□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms