Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 MIR5196-201ENST00000578146 115 ntBASIC12.36□□□□□ -0.43
GFRA1P56159 AL136982.5-201ENST00000605222 294 ntBASIC12.36□□□□□ -0.43
GFRA1P56159 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
GFRA1P56159 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
GFRA1P56159 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC12.36□□□□□ -0.43
GFRA1P56159 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
GFRA1P56159 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
GFRA1P56159 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
GFRA1P56159 ART3-201ENST00000341029 1517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
GFRA1P56159 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC12.36□□□□□ -0.43
GFRA1P56159 DANT2-201ENST00000430756 2079 ntTSL 3 BASIC12.36□□□□□ -0.43
GFRA1P56159 AL513497.1-201ENST00000624273 2083 ntBASIC12.36□□□□□ -0.43
GFRA1P56159 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
GFRA1P56159 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
GFRA1P56159 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
GFRA1P56159 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC12.35□□□□□ -0.43
GFRA1P56159 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC12.35□□□□□ -0.43
GFRA1P56159 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC12.35□□□□□ -0.43
GFRA1P56159 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
GFRA1P56159 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
GFRA1P56159 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
GFRA1P56159 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
GFRA1P56159 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
GFRA1P56159 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC12.35□□□□□ -0.43
GFRA1P56159 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
GFRA1P56159 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC12.35□□□□□ -0.43
GFRA1P56159 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC12.35□□□□□ -0.43
GFRA1P56159 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
GFRA1P56159 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
GFRA1P56159 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
GFRA1P56159 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
GFRA1P56159 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
GFRA1P56159 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
GFRA1P56159 PSAT1P2-201ENST00000426107 972 ntBASIC12.35□□□□□ -0.43
GFRA1P56159 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC12.35□□□□□ -0.43
GFRA1P56159 AC022113.2-201ENST00000504935 704 ntTSL 3 BASIC12.35□□□□□ -0.43
GFRA1P56159 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
GFRA1P56159 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
GFRA1P56159 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC12.35□□□□□ -0.43
GFRA1P56159 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC12.35□□□□□ -0.43
GFRA1P56159 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC12.35□□□□□ -0.43
GFRA1P56159 TRMT112P3-201ENST00000580149 358 ntBASIC12.35□□□□□ -0.43
GFRA1P56159 AC095350.1-204ENST00000585405 616 ntTSL 5 BASIC12.35□□□□□ -0.43
GFRA1P56159 AC012087.1-201ENST00000608068 809 ntTSL 5 BASIC12.35□□□□□ -0.43
GFRA1P56159 Metazoa_SRP.141-201ENST00000615072 282 ntBASIC12.35□□□□□ -0.43
GFRA1P56159 AC026120.2-201ENST00000617239 309 ntBASIC12.35□□□□□ -0.43
GFRA1P56159 LINC01869-204ENST00000635639 1047 ntTSL 5 BASIC12.35□□□□□ -0.43
GFRA1P56159 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
GFRA1P56159 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
GFRA1P56159 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC12.35□□□□□ -0.43
GFRA1P56159 CNTNAP3P2-201ENST00000617175 3861 ntBASIC12.35□□□□□ -0.43
GFRA1P56159 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
GFRA1P56159 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC12.35□□□□□ -0.43
GFRA1P56159 AC092053.3-201ENST00000641308 4975 ntBASIC12.35□□□□□ -0.43
GFRA1P56159 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
GFRA1P56159 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
GFRA1P56159 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
GFRA1P56159 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
GFRA1P56159 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
GFRA1P56159 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
GFRA1P56159 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
GFRA1P56159 AC041040.2-201ENST00000622926 2899 ntBASIC12.35□□□□□ -0.43
GFRA1P56159 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
GFRA1P56159 LINC00638-201ENST00000555578 2518 ntBASIC12.35□□□□□ -0.43
GFRA1P56159 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
GFRA1P56159 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
GFRA1P56159 ERG-211ENST00000453032 1595 ntTSL 2 BASIC12.35□□□□□ -0.43
GFRA1P56159 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
GFRA1P56159 CCDC178-201ENST00000300227 3087 ntAPPRIS P3 TSL 2 BASIC12.34□□□□□ -0.43
GFRA1P56159 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
GFRA1P56159 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
GFRA1P56159 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
GFRA1P56159 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
GFRA1P56159 AL358781.1-202ENST00000321081 1360 ntBASIC12.34□□□□□ -0.43
GFRA1P56159 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC12.34□□□□□ -0.43
GFRA1P56159 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC12.34□□□□□ -0.43
GFRA1P56159 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
GFRA1P56159 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC12.34□□□□□ -0.43
GFRA1P56159 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
GFRA1P56159 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
GFRA1P56159 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
GFRA1P56159 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC12.34□□□□□ -0.43
GFRA1P56159 ZNF493-208ENST00000599461 1769 ntBASIC12.34□□□□□ -0.43
GFRA1P56159 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
GFRA1P56159 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC12.34□□□□□ -0.43
GFRA1P56159 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
GFRA1P56159 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
GFRA1P56159 SFMBT2-202ENST00000379711 692 ntTSL 5 BASIC12.34□□□□□ -0.43
GFRA1P56159 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
GFRA1P56159 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC12.34□□□□□ -0.43
GFRA1P56159 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC12.34□□□□□ -0.43
GFRA1P56159 ELFN1-AS1-201ENST00000415399 636 ntTSL 5 BASIC12.34□□□□□ -0.43
GFRA1P56159 AL161733.1-201ENST00000421067 462 ntTSL 3 BASIC12.34□□□□□ -0.43
GFRA1P56159 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC12.34□□□□□ -0.43
GFRA1P56159 BX322557.2-201ENST00000445242 379 ntTSL 3 BASIC12.34□□□□□ -0.43
GFRA1P56159 HNRNPA1P56-201ENST00000505767 954 ntBASIC12.34□□□□□ -0.43
GFRA1P56159 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC12.34□□□□□ -0.43
GFRA1P56159 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC12.34□□□□□ -0.43
GFRA1P56159 PRSS55-203ENST00000522210 1005 ntTSL 2 BASIC12.34□□□□□ -0.43
GFRA1P56159 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms