Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 POU5F2-201ENST00000606183 8418 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
CEACAM3P40198 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC11.39□□□□□ -0.59
CEACAM3P40198 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
CEACAM3P40198 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
CEACAM3P40198 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CEACAM3P40198 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
CEACAM3P40198 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
CEACAM3P40198 TMEM120B-204ENST00000449592 7461 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CEACAM3P40198 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CEACAM3P40198 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
CEACAM3P40198 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
CEACAM3P40198 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
CEACAM3P40198 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
CEACAM3P40198 RPL8P2-201ENST00000430538 502 ntBASIC11.39□□□□□ -0.59
CEACAM3P40198 TSACC-208ENST00000481479 741 ntTSL 2 BASIC11.39□□□□□ -0.59
CEACAM3P40198 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC11.39□□□□□ -0.59
CEACAM3P40198 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
CEACAM3P40198 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC11.39□□□□□ -0.59
CEACAM3P40198 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC11.39□□□□□ -0.59
CEACAM3P40198 AC138701.2-201ENST00000553634 226 ntBASIC11.39□□□□□ -0.59
CEACAM3P40198 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC11.39□□□□□ -0.59
CEACAM3P40198 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC11.39□□□□□ -0.59
CEACAM3P40198 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
CEACAM3P40198 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC11.39□□□□□ -0.59
CEACAM3P40198 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CEACAM3P40198 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC11.39□□□□□ -0.59
CEACAM3P40198 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC11.39□□□□□ -0.59
CEACAM3P40198 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CEACAM3P40198 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
CEACAM3P40198 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC11.39□□□□□ -0.59
CEACAM3P40198 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
CEACAM3P40198 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC11.39□□□□□ -0.59
CEACAM3P40198 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
CEACAM3P40198 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
CEACAM3P40198 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC11.39□□□□□ -0.59
CEACAM3P40198 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC11.39□□□□□ -0.59
CEACAM3P40198 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
CEACAM3P40198 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
CEACAM3P40198 AC111170.3-201ENST00000624282 2464 ntBASIC11.38□□□□□ -0.59
CEACAM3P40198 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CEACAM3P40198 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
CEACAM3P40198 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CEACAM3P40198 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC11.38□□□□□ -0.59
CEACAM3P40198 AC067931.2-201ENST00000623655 2003 ntBASIC11.38□□□□□ -0.59
CEACAM3P40198 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CEACAM3P40198 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC11.38□□□□□ -0.59
CEACAM3P40198 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
CEACAM3P40198 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
CEACAM3P40198 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC11.38□□□□□ -0.59
CEACAM3P40198 LDLRAD4-201ENST00000359446 8486 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CEACAM3P40198 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
CEACAM3P40198 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
CEACAM3P40198 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC11.38□□□□□ -0.59
CEACAM3P40198 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC11.38□□□□□ -0.59
CEACAM3P40198 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CEACAM3P40198 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CEACAM3P40198 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
CEACAM3P40198 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
CEACAM3P40198 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
CEACAM3P40198 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
CEACAM3P40198 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CEACAM3P40198 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CEACAM3P40198 MIR557-201ENST00000385239 98 ntBASIC11.38□□□□□ -0.59
CEACAM3P40198 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC11.38□□□□□ -0.59
CEACAM3P40198 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC11.38□□□□□ -0.59
CEACAM3P40198 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
CEACAM3P40198 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC11.38□□□□□ -0.59
CEACAM3P40198 AC234782.1-201ENST00000451950 919 ntBASIC11.38□□□□□ -0.59
CEACAM3P40198 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC11.38□□□□□ -0.59
CEACAM3P40198 UPF3AP2-201ENST00000457924 1132 ntBASIC11.38□□□□□ -0.59
CEACAM3P40198 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC11.38□□□□□ -0.59
CEACAM3P40198 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
CEACAM3P40198 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
CEACAM3P40198 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
CEACAM3P40198 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC11.38□□□□□ -0.59
CEACAM3P40198 IGLV3-15-201ENST00000518356 244 ntBASIC11.38□□□□□ -0.59
CEACAM3P40198 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CEACAM3P40198 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC11.38□□□□□ -0.59
CEACAM3P40198 FGFR3P5-201ENST00000564496 886 ntBASIC11.38□□□□□ -0.59
CEACAM3P40198 RN7SL574P-201ENST00000581512 297 ntBASIC11.38□□□□□ -0.59
CEACAM3P40198 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CEACAM3P40198 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CEACAM3P40198 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
CEACAM3P40198 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
CEACAM3P40198 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
CEACAM3P40198 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
CEACAM3P40198 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CEACAM3P40198 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CEACAM3P40198 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CEACAM3P40198 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC11.38□□□□□ -0.59
CEACAM3P40198 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
CEACAM3P40198 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CEACAM3P40198 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
CEACAM3P40198 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC11.38□□□□□ -0.59
CEACAM3P40198 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC11.38□□□□□ -0.59
CEACAM3P40198 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC11.38□□□□□ -0.59
CEACAM3P40198 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
CEACAM3P40198 RPS6KA2-211ENST00000510118 5992 ntTSL 2 BASIC11.38□□□□□ -0.59
CEACAM3P40198 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
CEACAM3P40198 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms