Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 HLA-DQA1-201ENST00000343139 1591 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
PDE6BP35913 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
PDE6BP35913 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PDE6BP35913 ELP4-223ENST00000640342 1392 ntTSL 5 BASIC16.82■□□□□ 0.28
PDE6BP35913 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
PDE6BP35913 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PDE6BP35913 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
PDE6BP35913 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PDE6BP35913 ZWINT-202ENST00000361148 807 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
PDE6BP35913 AL954722.1-201ENST00000431238 259 ntBASIC16.82■□□□□ 0.28
PDE6BP35913 ZBTB46-AS1-201ENST00000435912 533 ntTSL 3 BASIC16.82■□□□□ 0.28
PDE6BP35913 AL162377.1-202ENST00000456688 1181 ntTSL 2 BASIC16.82■□□□□ 0.28
PDE6BP35913 HAND2-AS1-208ENST00000504740 837 ntTSL 3 BASIC16.82■□□□□ 0.28
PDE6BP35913 CLNK-203ENST00000507719 1143 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PDE6BP35913 OR52V1P-201ENST00000515557 898 ntBASIC16.82■□□□□ 0.28
PDE6BP35913 AAMDC-210ENST00000532481 690 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PDE6BP35913 TRAPPC4-212ENST00000533058 1209 ntTSL 2 BASIC16.82■□□□□ 0.28
PDE6BP35913 Metazoa_SRP.173-201ENST00000614020 273 ntBASIC16.82■□□□□ 0.28
PDE6BP35913 OR5L1-201ENST00000625203 1110 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
PDE6BP35913 ERAS-202ENST00000636362 826 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
PDE6BP35913 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
PDE6BP35913 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PDE6BP35913 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PDE6BP35913 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
PDE6BP35913 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC16.82■□□□□ 0.28
PDE6BP35913 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
PDE6BP35913 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
PDE6BP35913 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
PDE6BP35913 AC020763.3-201ENST00000625095 2904 ntBASIC16.82■□□□□ 0.28
PDE6BP35913 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PDE6BP35913 BPIFB1-201ENST00000253354 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PDE6BP35913 MCRS1-203ENST00000546244 1686 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PDE6BP35913 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDE6BP35913 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDE6BP35913 DAP3-201ENST00000343043 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDE6BP35913 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDE6BP35913 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC16.81■□□□□ 0.28
PDE6BP35913 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDE6BP35913 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC16.81■□□□□ 0.28
PDE6BP35913 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC16.81■□□□□ 0.28
PDE6BP35913 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDE6BP35913 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PDE6BP35913 MYO15B-237ENST00000642007 4893 ntBASIC16.81■□□□□ 0.28
PDE6BP35913 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC16.81■□□□□ 0.28
PDE6BP35913 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
PDE6BP35913 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
PDE6BP35913 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC16.81■□□□□ 0.28
PDE6BP35913 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDE6BP35913 SERF2-205ENST00000403425 690 ntTSL 2 BASIC16.81■□□□□ 0.28
PDE6BP35913 RBMX2P5-201ENST00000424312 969 ntBASIC16.81■□□□□ 0.28
PDE6BP35913 AC105443.1-201ENST00000433754 712 ntBASIC16.81■□□□□ 0.28
PDE6BP35913 RPL35P1-201ENST00000450819 370 ntBASIC16.81■□□□□ 0.28
PDE6BP35913 AC004889.1-201ENST00000498693 856 ntTSL 5 BASIC16.81■□□□□ 0.28
PDE6BP35913 AL662899.2-201ENST00000503322 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDE6BP35913 AC090200.1-201ENST00000522918 590 ntTSL 2 BASIC16.81■□□□□ 0.28
PDE6BP35913 C3orf84-203ENST00000545770 706 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
PDE6BP35913 ABCD1P3-201ENST00000562927 605 ntBASIC16.81■□□□□ 0.28
PDE6BP35913 AC092720.1-202ENST00000565824 555 ntTSL 4 BASIC16.81■□□□□ 0.28
PDE6BP35913 AC011483.3-201ENST00000601506 826 ntTSL 3 BASIC16.81■□□□□ 0.28
PDE6BP35913 AC087072.1-201ENST00000603727 421 ntBASIC16.81■□□□□ 0.28
PDE6BP35913 AC139100.2-201ENST00000616901 662 ntBASIC16.81■□□□□ 0.28
PDE6BP35913 AC138627.1-201ENST00000641127 1257 ntBASIC16.81■□□□□ 0.28
PDE6BP35913 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
PDE6BP35913 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
PDE6BP35913 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDE6BP35913 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDE6BP35913 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
PDE6BP35913 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDE6BP35913 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
PDE6BP35913 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDE6BP35913 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDE6BP35913 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDE6BP35913 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC16.81■□□□□ 0.28
PDE6BP35913 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
PDE6BP35913 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDE6BP35913 SMUG1-220ENST00000513838 2119 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PDE6BP35913 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDE6BP35913 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDE6BP35913 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
PDE6BP35913 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDE6BP35913 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
PDE6BP35913 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDE6BP35913 ANAPC15-203ENST00000502597 1481 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PDE6BP35913 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
PDE6BP35913 TKT-201ENST00000296289 1931 ntTSL 5 BASIC16.8■□□□□ 0.28
PDE6BP35913 PSMC3IP-201ENST00000253789 1408 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PDE6BP35913 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC16.8■□□□□ 0.28
PDE6BP35913 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDE6BP35913 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
PDE6BP35913 HLA-DMB-258ENST00000418107 1397 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
PDE6BP35913 MYC-206ENST00000613283 1365 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDE6BP35913 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PDE6BP35913 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC16.8■□□□□ 0.28
PDE6BP35913 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDE6BP35913 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDE6BP35913 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
PDE6BP35913 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
PDE6BP35913 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDE6BP35913 COA6-201ENST00000366612 1013 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDE6BP35913 MANEA-202ENST00000369293 1076 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms