Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
KRT9P35527 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
KRT9P35527 SAP30BP-225ENST00000584667 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
KRT9P35527 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
KRT9P35527 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
KRT9P35527 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
KRT9P35527 NPPA-201ENST00000376476 728 ntTSL 3 BASIC15.21■□□□□ 0.03
KRT9P35527 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC15.21■□□□□ 0.03
KRT9P35527 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
KRT9P35527 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC15.21■□□□□ 0.03
KRT9P35527 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC15.21■□□□□ 0.03
KRT9P35527 AC009779.1-201ENST00000551138 283 ntBASIC15.21■□□□□ 0.03
KRT9P35527 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC15.21■□□□□ 0.03
KRT9P35527 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
KRT9P35527 AC013355.1-201ENST00000562625 723 ntBASIC15.21■□□□□ 0.03
KRT9P35527 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
KRT9P35527 NKG7-204ENST00000595217 816 ntTSL 2 BASIC15.21■□□□□ 0.03
KRT9P35527 AL132994.2-201ENST00000603120 687 ntBASIC15.21■□□□□ 0.03
KRT9P35527 MIR6752-201ENST00000618442 71 ntBASIC15.21■□□□□ 0.03
KRT9P35527 AL008638.5-201ENST00000623814 1298 ntBASIC15.21■□□□□ 0.03
KRT9P35527 PCID2-205ENST00000375477 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
KRT9P35527 ALG8-202ENST00000376156 1677 ntTSL 2 BASIC15.21■□□□□ 0.03
KRT9P35527 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC15.21■□□□□ 0.03
KRT9P35527 PRKAB1-205ENST00000540121 1673 ntTSL 5 BASIC15.21■□□□□ 0.03
KRT9P35527 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
KRT9P35527 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC15.21■□□□□ 0.02
KRT9P35527 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.02
KRT9P35527 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
KRT9P35527 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC15.21■□□□□ 0.02
KRT9P35527 LDLRAD4-AS1-201ENST00000588672 2190 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
KRT9P35527 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
KRT9P35527 VILL-201ENST00000283713 2970 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
KRT9P35527 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
KRT9P35527 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
KRT9P35527 GPR107-208ENST00000610997 2813 ntTSL 5 BASIC15.21■□□□□ 0.02
KRT9P35527 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC15.2■□□□□ 0.02
KRT9P35527 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
KRT9P35527 ZNF573-204ENST00000392138 2266 ntTSL 2 BASIC15.2■□□□□ 0.02
KRT9P35527 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC15.2■□□□□ 0.02
KRT9P35527 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
KRT9P35527 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
KRT9P35527 NEK3-205ENST00000610828 2396 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
KRT9P35527 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC15.2■□□□□ 0.02
KRT9P35527 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
KRT9P35527 STK40-201ENST00000359297 4837 ntTSL 2 BASIC15.2■□□□□ 0.02
KRT9P35527 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
KRT9P35527 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC15.2■□□□□ 0.02
KRT9P35527 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
KRT9P35527 MIR1908-201ENST00000410394 80 ntBASIC15.2■□□□□ 0.02
KRT9P35527 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC15.2■□□□□ 0.02
KRT9P35527 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC15.2■□□□□ 0.02
KRT9P35527 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC15.2■□□□□ 0.02
KRT9P35527 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC15.2■□□□□ 0.02
KRT9P35527 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC15.2■□□□□ 0.02
KRT9P35527 CFL1-212ENST00000531413 636 ntTSL 3 BASIC15.2■□□□□ 0.02
KRT9P35527 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC15.2■□□□□ 0.02
KRT9P35527 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC15.2■□□□□ 0.02
KRT9P35527 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC15.2■□□□□ 0.02
KRT9P35527 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC15.2■□□□□ 0.02
KRT9P35527 SKA2-205ENST00000580541 689 ntTSL 3 BASIC15.2■□□□□ 0.02
KRT9P35527 RN7SL219P-201ENST00000582872 296 ntBASIC15.2■□□□□ 0.02
KRT9P35527 NAT9-222ENST00000583476 583 ntTSL 3 BASIC15.2■□□□□ 0.02
KRT9P35527 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC15.2■□□□□ 0.02
KRT9P35527 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
KRT9P35527 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
KRT9P35527 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
KRT9P35527 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC15.2■□□□□ 0.02
KRT9P35527 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
KRT9P35527 RASA4CP-203ENST00000446874 3193 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
KRT9P35527 INCENP-201ENST00000278849 3698 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
KRT9P35527 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
KRT9P35527 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
KRT9P35527 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
KRT9P35527 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
KRT9P35527 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
KRT9P35527 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
KRT9P35527 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
KRT9P35527 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
KRT9P35527 ATG5-202ENST00000360666 2712 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
KRT9P35527 FAM13B-203ENST00000425075 3098 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
KRT9P35527 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
KRT9P35527 NIT1-202ENST00000368008 2081 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
KRT9P35527 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
KRT9P35527 AL139385.1-201ENST00000611744 3272 ntBASIC15.19■□□□□ 0.02
KRT9P35527 TMEM78-201ENST00000323223 2175 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
KRT9P35527 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC15.19■□□□□ 0.02
KRT9P35527 ZNF239-205ENST00000535642 1904 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
KRT9P35527 XBP1-204ENST00000405219 1690 ntTSL 2 BASIC15.19■□□□□ 0.02
KRT9P35527 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
KRT9P35527 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC15.19■□□□□ 0.02
KRT9P35527 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
KRT9P35527 TMOD1-201ENST00000259365 3343 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
KRT9P35527 SLC37A4-202ENST00000357590 2356 ntTSL 5 BASIC15.19■□□□□ 0.02
KRT9P35527 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
KRT9P35527 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC15.19■□□□□ 0.02
KRT9P35527 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
KRT9P35527 KDM2B-215ENST00000542973 3170 ntTSL 2 BASIC15.19■□□□□ 0.02
KRT9P35527 PRMT7-201ENST00000339507 4238 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
KRT9P35527 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
KRT9P35527 DPY19L2P2-205ENST00000439473 3994 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms