Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC10.97□□□□□ -0.65
TRGV3P03979 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
TRGV3P03979 LCA5-202ENST00000392959 4719 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TRGV3P03979 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
TRGV3P03979 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
TRGV3P03979 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
TRGV3P03979 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
TRGV3P03979 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
TRGV3P03979 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TRGV3P03979 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TRGV3P03979 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TRGV3P03979 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC10.97□□□□□ -0.65
TRGV3P03979 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
TRGV3P03979 NSD2-206ENST00000382895 7827 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TRGV3P03979 CD38-201ENST00000226279 5668 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TRGV3P03979 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TRGV3P03979 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC10.97□□□□□ -0.65
TRGV3P03979 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TRGV3P03979 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TRGV3P03979 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
TRGV3P03979 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TRGV3P03979 PARVG-202ENST00000415224 999 ntTSL 2 BASIC10.97□□□□□ -0.65
TRGV3P03979 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC10.97□□□□□ -0.65
TRGV3P03979 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC10.97□□□□□ -0.65
TRGV3P03979 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC10.97□□□□□ -0.65
TRGV3P03979 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC10.97□□□□□ -0.65
TRGV3P03979 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
TRGV3P03979 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC10.97□□□□□ -0.65
TRGV3P03979 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC10.97□□□□□ -0.65
TRGV3P03979 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC10.97□□□□□ -0.65
TRGV3P03979 AC007718.1-201ENST00000621078 280 ntBASIC10.97□□□□□ -0.65
TRGV3P03979 AC079336.7-201ENST00000623428 1078 ntBASIC10.97□□□□□ -0.65
TRGV3P03979 AC006453.1-201ENST00000636037 1257 ntBASIC10.97□□□□□ -0.65
TRGV3P03979 AL139424.3-202ENST00000641619 917 ntBASIC10.97□□□□□ -0.65
TRGV3P03979 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TRGV3P03979 TUBB4AP1-201ENST00000450755 1325 ntBASIC10.97□□□□□ -0.65
TRGV3P03979 CDH11-201ENST00000268603 6857 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TRGV3P03979 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC10.97□□□□□ -0.65
TRGV3P03979 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TRGV3P03979 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TRGV3P03979 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC10.97□□□□□ -0.65
TRGV3P03979 DNAH10OS-201ENST00000514254 5040 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
TRGV3P03979 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TRGV3P03979 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
TRGV3P03979 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
TRGV3P03979 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TRGV3P03979 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC10.97□□□□□ -0.65
TRGV3P03979 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
TRGV3P03979 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TRGV3P03979 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
TRGV3P03979 AC072061.1-201ENST00000569710 2234 ntBASIC10.97□□□□□ -0.65
TRGV3P03979 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
TRGV3P03979 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TRGV3P03979 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
TRGV3P03979 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC10.97□□□□□ -0.65
TRGV3P03979 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
TRGV3P03979 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TRGV3P03979 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TRGV3P03979 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TRGV3P03979 KCNS2-202ENST00000521839 4340 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
TRGV3P03979 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
TRGV3P03979 UQCRB-201ENST00000287022 5575 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TRGV3P03979 SNX33-201ENST00000308527 8008 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TRGV3P03979 CACNA1G-222ENST00000510366 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
TRGV3P03979 CACNA1G-227ENST00000513964 6735 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
TRGV3P03979 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC10.96□□□□□ -0.65
TRGV3P03979 ADM2-202ENST00000395738 4276 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
TRGV3P03979 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
TRGV3P03979 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
TRGV3P03979 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
TRGV3P03979 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC10.96□□□□□ -0.65
TRGV3P03979 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
TRGV3P03979 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
TRGV3P03979 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC10.96□□□□□ -0.65
TRGV3P03979 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
TRGV3P03979 AL359183.1-201ENST00000623796 2132 ntBASIC10.96□□□□□ -0.65
TRGV3P03979 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC10.96□□□□□ -0.65
TRGV3P03979 AC011481.3-201ENST00000623895 5594 ntBASIC10.96□□□□□ -0.65
TRGV3P03979 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC10.96□□□□□ -0.65
TRGV3P03979 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC10.96□□□□□ -0.65
TRGV3P03979 AC008620.2-201ENST00000510294 1569 ntBASIC10.96□□□□□ -0.65
TRGV3P03979 KRT8P43-201ENST00000406052 1458 ntBASIC10.96□□□□□ -0.65
TRGV3P03979 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
TRGV3P03979 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
TRGV3P03979 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
TRGV3P03979 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
TRGV3P03979 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
TRGV3P03979 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
TRGV3P03979 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
TRGV3P03979 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
TRGV3P03979 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC10.96□□□□□ -0.65
TRGV3P03979 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
TRGV3P03979 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
TRGV3P03979 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
TRGV3P03979 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC10.96□□□□□ -0.65
TRGV3P03979 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
TRGV3P03979 UPF3AP2-201ENST00000457924 1132 ntBASIC10.96□□□□□ -0.65
TRGV3P03979 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC10.96□□□□□ -0.65
TRGV3P03979 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC10.96□□□□□ -0.65
TRGV3P03979 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms