Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 UNC13B-207ENST00000619578 6426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
NPIPA3F8WFD2 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
NPIPA3F8WFD2 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC12.68□□□□□ -0.38
NPIPA3F8WFD2 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC12.68□□□□□ -0.38
NPIPA3F8WFD2 ARSD-202ENST00000381154 5159 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
NPIPA3F8WFD2 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
NPIPA3F8WFD2 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
NPIPA3F8WFD2 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
NPIPA3F8WFD2 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
NPIPA3F8WFD2 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
NPIPA3F8WFD2 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC12.67□□□□□ -0.38
NPIPA3F8WFD2 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NPIPA3F8WFD2 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NPIPA3F8WFD2 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NPIPA3F8WFD2 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC12.67□□□□□ -0.38
NPIPA3F8WFD2 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NPIPA3F8WFD2 USP39-220ENST00000613444 2161 ntTSL 2 BASIC12.67□□□□□ -0.38
NPIPA3F8WFD2 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
NPIPA3F8WFD2 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NPIPA3F8WFD2 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
NPIPA3F8WFD2 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
NPIPA3F8WFD2 SHMT1P1-201ENST00000419974 1312 ntBASIC12.67□□□□□ -0.38
NPIPA3F8WFD2 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NPIPA3F8WFD2 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NPIPA3F8WFD2 AC111170.3-201ENST00000624282 2464 ntBASIC12.67□□□□□ -0.38
NPIPA3F8WFD2 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC12.67□□□□□ -0.38
NPIPA3F8WFD2 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
NPIPA3F8WFD2 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NPIPA3F8WFD2 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC12.67□□□□□ -0.38
NPIPA3F8WFD2 AC061965.1-201ENST00000560524 1465 ntBASIC12.67□□□□□ -0.38
NPIPA3F8WFD2 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC12.67□□□□□ -0.38
NPIPA3F8WFD2 AP2A2-202ENST00000448903 4575 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
NPIPA3F8WFD2 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC12.67□□□□□ -0.38
NPIPA3F8WFD2 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NPIPA3F8WFD2 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
NPIPA3F8WFD2 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC12.67□□□□□ -0.38
NPIPA3F8WFD2 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NPIPA3F8WFD2 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
NPIPA3F8WFD2 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NPIPA3F8WFD2 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NPIPA3F8WFD2 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
NPIPA3F8WFD2 AK2P2-201ENST00000439142 405 ntBASIC12.67□□□□□ -0.38
NPIPA3F8WFD2 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC12.67□□□□□ -0.38
NPIPA3F8WFD2 RN7SL788P-201ENST00000460504 316 ntBASIC12.67□□□□□ -0.38
NPIPA3F8WFD2 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
NPIPA3F8WFD2 RN7SL767P-201ENST00000493013 295 ntBASIC12.67□□□□□ -0.38
NPIPA3F8WFD2 AC084752.1-201ENST00000509766 622 ntBASIC12.67□□□□□ -0.38
NPIPA3F8WFD2 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC12.67□□□□□ -0.38
NPIPA3F8WFD2 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC12.67□□□□□ -0.38
NPIPA3F8WFD2 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC12.67□□□□□ -0.38
NPIPA3F8WFD2 LINC00244-201ENST00000625073 613 ntBASIC12.67□□□□□ -0.38
NPIPA3F8WFD2 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
NPIPA3F8WFD2 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
NPIPA3F8WFD2 KRT8P18-201ENST00000413425 1445 ntBASIC12.67□□□□□ -0.38
NPIPA3F8WFD2 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NPIPA3F8WFD2 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC12.67□□□□□ -0.38
NPIPA3F8WFD2 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
NPIPA3F8WFD2 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NPIPA3F8WFD2 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC12.67□□□□□ -0.38
NPIPA3F8WFD2 RB1-201ENST00000267163 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NPIPA3F8WFD2 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
NPIPA3F8WFD2 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NPIPA3F8WFD2 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
NPIPA3F8WFD2 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NPIPA3F8WFD2 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
NPIPA3F8WFD2 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
NPIPA3F8WFD2 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
NPIPA3F8WFD2 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NPIPA3F8WFD2 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NPIPA3F8WFD2 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
NPIPA3F8WFD2 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NPIPA3F8WFD2 AMER3-202ENST00000423981 6172 ntAPPRIS P1 TSL 4 BASIC12.67□□□□□ -0.38
NPIPA3F8WFD2 AMT-256ENST00000638063 1783 ntTSL 5 BASIC12.66□□□□□ -0.38
NPIPA3F8WFD2 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
NPIPA3F8WFD2 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC12.66□□□□□ -0.38
NPIPA3F8WFD2 FAM120C-202ENST00000375180 8057 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
NPIPA3F8WFD2 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
NPIPA3F8WFD2 PAAF1-201ENST00000310571 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
NPIPA3F8WFD2 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
NPIPA3F8WFD2 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
NPIPA3F8WFD2 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC12.66□□□□□ -0.38
NPIPA3F8WFD2 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
NPIPA3F8WFD2 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
NPIPA3F8WFD2 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC12.66□□□□□ -0.38
NPIPA3F8WFD2 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
NPIPA3F8WFD2 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC12.66□□□□□ -0.38
NPIPA3F8WFD2 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC12.66□□□□□ -0.38
NPIPA3F8WFD2 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
NPIPA3F8WFD2 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
NPIPA3F8WFD2 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
NPIPA3F8WFD2 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
NPIPA3F8WFD2 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
NPIPA3F8WFD2 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
NPIPA3F8WFD2 LINC00265-2P-201ENST00000413372 782 ntBASIC12.66□□□□□ -0.38
NPIPA3F8WFD2 PPP1R2P4-201ENST00000424051 595 ntBASIC12.66□□□□□ -0.38
NPIPA3F8WFD2 AC097065.1-201ENST00000425737 517 ntBASIC12.66□□□□□ -0.38
NPIPA3F8WFD2 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC12.66□□□□□ -0.38
NPIPA3F8WFD2 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC12.66□□□□□ -0.38
NPIPA3F8WFD2 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC12.66□□□□□ -0.38
NPIPA3F8WFD2 KRT8P2-201ENST00000556193 944 ntBASIC12.66□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms