Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
TMEM235A6NFC5 RBM4-201ENST00000310092 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TMEM235A6NFC5 FAM90A26-201ENST00000512047 2492 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
TMEM235A6NFC5 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TMEM235A6NFC5 TCF23-201ENST00000296096 4882 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TMEM235A6NFC5 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
TMEM235A6NFC5 PACSIN2-202ENST00000337959 3149 ntTSL 5 BASIC11.89□□□□□ -0.51
TMEM235A6NFC5 SLC26A8-202ENST00000394602 3144 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
TMEM235A6NFC5 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TMEM235A6NFC5 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
TMEM235A6NFC5 ESYT3-202ENST00000389567 4407 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TMEM235A6NFC5 YIPF6-201ENST00000374622 6134 ntTSL 2 BASIC11.89□□□□□ -0.51
TMEM235A6NFC5 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC11.89□□□□□ -0.51
TMEM235A6NFC5 AMT-256ENST00000638063 1783 ntTSL 5 BASIC11.89□□□□□ -0.51
TMEM235A6NFC5 ARHGAP33-203ENST00000314737 3858 ntAPPRIS P3 TSL 2 BASIC11.89□□□□□ -0.51
TMEM235A6NFC5 AGAP5-202ENST00000443782 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
TMEM235A6NFC5 AGAP4-203ENST00000448048 2439 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
TMEM235A6NFC5 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC11.89□□□□□ -0.51
TMEM235A6NFC5 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
TMEM235A6NFC5 CALD1-205ENST00000422748 2665 ntTSL 2 BASIC11.89□□□□□ -0.51
TMEM235A6NFC5 DGCR2-201ENST00000263196 4480 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TMEM235A6NFC5 DGCR2-206ENST00000545799 4484 ntTSL 5 BASIC11.89□□□□□ -0.51
TMEM235A6NFC5 AC010336.1-201ENST00000539278 4739 ntBASIC11.89□□□□□ -0.51
TMEM235A6NFC5 DIO1-216ENST00000613679 1856 ntAPPRIS ALT1 TSL 5 BASIC11.89□□□□□ -0.51
TMEM235A6NFC5 PSMD12-201ENST00000356126 4406 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TMEM235A6NFC5 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC11.89□□□□□ -0.51
TMEM235A6NFC5 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
TMEM235A6NFC5 GRIA4-210ENST00000527669 2647 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
TMEM235A6NFC5 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TMEM235A6NFC5 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
TMEM235A6NFC5 STK40-203ENST00000373130 3628 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
TMEM235A6NFC5 TP73-201ENST00000346387 4854 ntTSL 5 BASIC11.88□□□□□ -0.51
TMEM235A6NFC5 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
TMEM235A6NFC5 CYP4F23P-201ENST00000593402 1579 ntBASIC11.88□□□□□ -0.51
TMEM235A6NFC5 CSTF2-203ENST00000415585 2074 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
TMEM235A6NFC5 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC11.88□□□□□ -0.51
TMEM235A6NFC5 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC11.88□□□□□ -0.51
TMEM235A6NFC5 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
TMEM235A6NFC5 ZNF571-AS1-203ENST00000586139 2684 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
TMEM235A6NFC5 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
TMEM235A6NFC5 AC144522.1-201ENST00000625111 1658 ntBASIC11.88□□□□□ -0.51
TMEM235A6NFC5 DUT-208ENST00000559540 1441 ntTSL 2 BASIC11.88□□□□□ -0.51
TMEM235A6NFC5 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
TMEM235A6NFC5 POLL-202ENST00000339310 2289 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
TMEM235A6NFC5 ARGLU1-203ENST00000400198 3390 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
TMEM235A6NFC5 SUPT20HL1-201ENST00000436466 2618 ntBASIC11.88□□□□□ -0.51
TMEM235A6NFC5 LIMS1-205ENST00000410093 1526 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
TMEM235A6NFC5 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
TMEM235A6NFC5 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
TMEM235A6NFC5 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
TMEM235A6NFC5 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
TMEM235A6NFC5 RNF43-201ENST00000407977 5516 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
TMEM235A6NFC5 OR2R1P-201ENST00000441404 914 ntBASIC11.88□□□□□ -0.51
TMEM235A6NFC5 AC002472.2-201ENST00000442739 958 ntBASIC11.88□□□□□ -0.51
TMEM235A6NFC5 ESRRAP2-203ENST00000453309 822 ntTSL 5 BASIC11.88□□□□□ -0.51
TMEM235A6NFC5 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
TMEM235A6NFC5 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC11.88□□□□□ -0.51
TMEM235A6NFC5 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
TMEM235A6NFC5 AC006122.1-201ENST00000493323 440 ntBASIC11.88□□□□□ -0.51
TMEM235A6NFC5 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC11.88□□□□□ -0.51
TMEM235A6NFC5 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC11.88□□□□□ -0.51
TMEM235A6NFC5 SLC25A47P1-201ENST00000531577 414 ntBASIC11.88□□□□□ -0.51
TMEM235A6NFC5 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC11.88□□□□□ -0.51
TMEM235A6NFC5 RPL28-206ENST00000558752 671 ntTSL 3 BASIC11.88□□□□□ -0.51
TMEM235A6NFC5 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
TMEM235A6NFC5 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC11.88□□□□□ -0.51
TMEM235A6NFC5 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC11.88□□□□□ -0.51
TMEM235A6NFC5 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC11.88□□□□□ -0.51
TMEM235A6NFC5 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
TMEM235A6NFC5 AC009884.2-201ENST00000603110 324 ntBASIC11.88□□□□□ -0.51
TMEM235A6NFC5 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC11.88□□□□□ -0.51
TMEM235A6NFC5 AC133540.1-201ENST00000620845 1019 ntBASIC11.88□□□□□ -0.51
TMEM235A6NFC5 GREB1-206ENST00000396123 5296 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
TMEM235A6NFC5 PAM-203ENST00000346918 3302 ntTSL 5 BASIC11.88□□□□□ -0.51
TMEM235A6NFC5 BAK1-203ENST00000442998 2212 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
TMEM235A6NFC5 ABCC4-206ENST00000536256 2840 ntTSL 2 BASIC11.88□□□□□ -0.51
TMEM235A6NFC5 TNRC6B-203ENST00000402203 3444 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
TMEM235A6NFC5 TBC1D14-208ENST00000451522 4149 ntAPPRIS ALT1 TSL 5 BASIC11.88□□□□□ -0.51
TMEM235A6NFC5 C10orf105-202ENST00000441508 4836 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
TMEM235A6NFC5 SERPINA13P-201ENST00000469935 1718 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
TMEM235A6NFC5 RAB6B-201ENST00000285208 5526 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
TMEM235A6NFC5 TUBGCP2-210ENST00000543663 4302 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
TMEM235A6NFC5 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
TMEM235A6NFC5 GTF2IRD1P1-202ENST00000457166 2426 ntTSL 2 BASIC11.88□□□□□ -0.51
TMEM235A6NFC5 TCF3-220ENST00000611869 4409 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
TMEM235A6NFC5 BISPR-204ENST00000634675 1806 ntTSL 2 BASIC11.88□□□□□ -0.51
TMEM235A6NFC5 KCNMA1-208ENST00000372440 3849 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
TMEM235A6NFC5 KCNMA1-227ENST00000638203 3840 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
TMEM235A6NFC5 KCNMA1-232ENST00000638306 3811 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
TMEM235A6NFC5 KCNMA1-233ENST00000638351 3849 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
TMEM235A6NFC5 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC11.88□□□□□ -0.51
TMEM235A6NFC5 CSF3-204ENST00000394149 1583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
TMEM235A6NFC5 MYRIP-203ENST00000425621 2981 ntTSL 2 BASIC11.88□□□□□ -0.51
TMEM235A6NFC5 SPATS2-201ENST00000321898 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TMEM235A6NFC5 ACTN1-202ENST00000376839 2824 ntTSL 2 BASIC11.87□□□□□ -0.51
TMEM235A6NFC5 KCNMA1-287ENST00000640632 2808 ntTSL 2 BASIC11.87□□□□□ -0.51
TMEM235A6NFC5 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC11.87□□□□□ -0.51
TMEM235A6NFC5 LINC01623-201ENST00000440244 2458 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
TMEM235A6NFC5 OFD1-201ENST00000340096 3611 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
TMEM235A6NFC5 DPYSL5-201ENST00000288699 5209 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms