Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
HLA-DRB4X5D2U9 SLC16A6P1-201ENST00000413214 1059 ntBASIC10.54□□□□□ -0.72
HLA-DRB4X5D2U9 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
HLA-DRB4X5D2U9 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC10.54□□□□□ -0.72
HLA-DRB4X5D2U9 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
HLA-DRB4X5D2U9 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
HLA-DRB4X5D2U9 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC10.54□□□□□ -0.72
HLA-DRB4X5D2U9 USP17L7-201ENST00000530447 2022 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
HLA-DRB4X5D2U9 EMC4-209ENST00000559421 497 ntTSL 2 BASIC10.54□□□□□ -0.72
HLA-DRB4X5D2U9 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC10.54□□□□□ -0.72
HLA-DRB4X5D2U9 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC10.54□□□□□ -0.72
HLA-DRB4X5D2U9 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
HLA-DRB4X5D2U9 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC10.54□□□□□ -0.72
HLA-DRB4X5D2U9 MIR6869-201ENST00000619434 62 ntBASIC10.54□□□□□ -0.72
HLA-DRB4X5D2U9 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
HLA-DRB4X5D2U9 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
HLA-DRB4X5D2U9 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC10.54□□□□□ -0.72
HLA-DRB4X5D2U9 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
HLA-DRB4X5D2U9 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
HLA-DRB4X5D2U9 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
HLA-DRB4X5D2U9 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
HLA-DRB4X5D2U9 RCC2P1-201ENST00000452257 1476 ntBASIC10.54□□□□□ -0.72
HLA-DRB4X5D2U9 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC10.54□□□□□ -0.72
HLA-DRB4X5D2U9 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
HLA-DRB4X5D2U9 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
HLA-DRB4X5D2U9 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
HLA-DRB4X5D2U9 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
HLA-DRB4X5D2U9 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
HLA-DRB4X5D2U9 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
HLA-DRB4X5D2U9 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC10.53□□□□□ -0.72
HLA-DRB4X5D2U9 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC10.53□□□□□ -0.72
HLA-DRB4X5D2U9 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
HLA-DRB4X5D2U9 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC10.53□□□□□ -0.72
HLA-DRB4X5D2U9 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
HLA-DRB4X5D2U9 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
HLA-DRB4X5D2U9 PCDHB18P-202ENST00000526308 3197 ntBASIC10.53□□□□□ -0.72
HLA-DRB4X5D2U9 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC10.53□□□□□ -0.72
HLA-DRB4X5D2U9 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC10.53□□□□□ -0.72
HLA-DRB4X5D2U9 DUOX2-201ENST00000389039 6533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
HLA-DRB4X5D2U9 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
HLA-DRB4X5D2U9 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC10.53□□□□□ -0.72
HLA-DRB4X5D2U9 AL139158.3-201ENST00000641212 1562 ntBASIC10.53□□□□□ -0.72
HLA-DRB4X5D2U9 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC10.53□□□□□ -0.72
HLA-DRB4X5D2U9 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
HLA-DRB4X5D2U9 SAMD4A-201ENST00000251091 6565 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
HLA-DRB4X5D2U9 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
HLA-DRB4X5D2U9 RAPGEF4-AS1-202ENST00000435328 4625 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
HLA-DRB4X5D2U9 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC10.53□□□□□ -0.72
HLA-DRB4X5D2U9 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
HLA-DRB4X5D2U9 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
HLA-DRB4X5D2U9 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
HLA-DRB4X5D2U9 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
HLA-DRB4X5D2U9 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC10.53□□□□□ -0.72
HLA-DRB4X5D2U9 RNA5SP359-201ENST00000364838 113 ntBASIC10.53□□□□□ -0.72
HLA-DRB4X5D2U9 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
HLA-DRB4X5D2U9 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
HLA-DRB4X5D2U9 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC10.53□□□□□ -0.72
HLA-DRB4X5D2U9 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
HLA-DRB4X5D2U9 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC10.53□□□□□ -0.72
HLA-DRB4X5D2U9 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
HLA-DRB4X5D2U9 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC10.53□□□□□ -0.72
HLA-DRB4X5D2U9 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
HLA-DRB4X5D2U9 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
HLA-DRB4X5D2U9 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
HLA-DRB4X5D2U9 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
HLA-DRB4X5D2U9 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC10.53□□□□□ -0.72
HLA-DRB4X5D2U9 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC10.53□□□□□ -0.72
HLA-DRB4X5D2U9 AC090857.1-201ENST00000527400 390 ntBASIC10.53□□□□□ -0.72
HLA-DRB4X5D2U9 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC10.53□□□□□ -0.72
HLA-DRB4X5D2U9 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC10.53□□□□□ -0.72
HLA-DRB4X5D2U9 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC10.53□□□□□ -0.72
HLA-DRB4X5D2U9 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC10.53□□□□□ -0.72
HLA-DRB4X5D2U9 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC10.53□□□□□ -0.72
HLA-DRB4X5D2U9 AL645939.5-201ENST00000606834 243 ntBASIC10.53□□□□□ -0.72
HLA-DRB4X5D2U9 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
HLA-DRB4X5D2U9 AC134407.3-201ENST00000624035 2139 ntBASIC10.53□□□□□ -0.72
HLA-DRB4X5D2U9 AC244452.3-201ENST00000636814 210 ntBASIC10.53□□□□□ -0.72
HLA-DRB4X5D2U9 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
HLA-DRB4X5D2U9 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
HLA-DRB4X5D2U9 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
HLA-DRB4X5D2U9 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC10.53□□□□□ -0.72
HLA-DRB4X5D2U9 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC10.53□□□□□ -0.72
HLA-DRB4X5D2U9 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
HLA-DRB4X5D2U9 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
HLA-DRB4X5D2U9 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
HLA-DRB4X5D2U9 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
HLA-DRB4X5D2U9 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
HLA-DRB4X5D2U9 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC10.53□□□□□ -0.72
HLA-DRB4X5D2U9 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
HLA-DRB4X5D2U9 AL928654.5-201ENST00000624831 2501 ntBASIC10.53□□□□□ -0.72
HLA-DRB4X5D2U9 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC10.53□□□□□ -0.72
HLA-DRB4X5D2U9 PDE4DIP-227ENST00000529945 8824 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
HLA-DRB4X5D2U9 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
HLA-DRB4X5D2U9 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
HLA-DRB4X5D2U9 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
HLA-DRB4X5D2U9 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC10.53□□□□□ -0.72
HLA-DRB4X5D2U9 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
HLA-DRB4X5D2U9 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
HLA-DRB4X5D2U9 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
HLA-DRB4X5D2U9 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms