Protein–RNA interactions for Protein: Q8TBY8

PMFBP1, Polyamine-modulated factor 1-binding protein 1, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMFBP1Q8TBY8 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC18.89■□□□□ 0.61
PMFBP1Q8TBY8 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
PMFBP1Q8TBY8 F10-201ENST00000375551 1509 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PMFBP1Q8TBY8 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
PMFBP1Q8TBY8 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PMFBP1Q8TBY8 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PMFBP1Q8TBY8 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PMFBP1Q8TBY8 AC093462.1-201ENST00000621167 1683 ntBASIC18.89■□□□□ 0.61
PMFBP1Q8TBY8 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PMFBP1Q8TBY8 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PMFBP1Q8TBY8 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
PMFBP1Q8TBY8 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC18.88■□□□□ 0.61
PMFBP1Q8TBY8 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
PMFBP1Q8TBY8 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
PMFBP1Q8TBY8 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PMFBP1Q8TBY8 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC18.88■□□□□ 0.61
PMFBP1Q8TBY8 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PMFBP1Q8TBY8 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
PMFBP1Q8TBY8 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
PMFBP1Q8TBY8 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC18.88■□□□□ 0.61
PMFBP1Q8TBY8 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PMFBP1Q8TBY8 GZMB-201ENST00000216341 968 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PMFBP1Q8TBY8 CSHL1-201ENST00000259003 739 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PMFBP1Q8TBY8 RNF212-201ENST00000333673 1019 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
PMFBP1Q8TBY8 BPIFA4P-201ENST00000375465 1203 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PMFBP1Q8TBY8 AL359649.1-202ENST00000375713 443 ntTSL 5 BASIC18.88■□□□□ 0.61
PMFBP1Q8TBY8 AL513165.1-201ENST00000413915 289 ntTSL 3 BASIC18.88■□□□□ 0.61
PMFBP1Q8TBY8 RPL15-205ENST00000415719 830 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
PMFBP1Q8TBY8 AC007391.1-201ENST00000433893 504 ntTSL 2 BASIC18.88■□□□□ 0.61
PMFBP1Q8TBY8 AL121656.1-201ENST00000440786 482 ntTSL 5 BASIC18.88■□□□□ 0.61
PMFBP1Q8TBY8 RPSAP69-201ENST00000445739 546 ntTSL 4 BASIC18.88■□□□□ 0.61
PMFBP1Q8TBY8 CSHL1-206ENST00000450719 973 ntTSL 2 BASIC18.88■□□□□ 0.61
PMFBP1Q8TBY8 RPSAP70-201ENST00000504462 864 ntBASIC18.88■□□□□ 0.61
PMFBP1Q8TBY8 RNA5SP420-201ENST00000516997 137 ntBASIC18.88■□□□□ 0.61
PMFBP1Q8TBY8 AC004923.3-201ENST00000527532 355 ntBASIC18.88■□□□□ 0.61
PMFBP1Q8TBY8 ZFP1-207ENST00000567481 493 ntTSL 4 BASIC18.88■□□□□ 0.61
PMFBP1Q8TBY8 AC245369.7-201ENST00000631386 350 ntBASIC18.88■□□□□ 0.61
PMFBP1Q8TBY8 AL139424.3-202ENST00000641619 917 ntBASIC18.88■□□□□ 0.61
PMFBP1Q8TBY8 GPR45-201ENST00000258456 1307 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
PMFBP1Q8TBY8 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC18.88■□□□□ 0.61
PMFBP1Q8TBY8 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PMFBP1Q8TBY8 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PMFBP1Q8TBY8 SUCLA2-205ENST00000470760 1445 ntTSL 2 BASIC18.88■□□□□ 0.61
PMFBP1Q8TBY8 UCP2-202ENST00000536983 1413 ntTSL 5 BASIC18.88■□□□□ 0.61
PMFBP1Q8TBY8 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PMFBP1Q8TBY8 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
PMFBP1Q8TBY8 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC18.88■□□□□ 0.61
PMFBP1Q8TBY8 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC18.88■□□□□ 0.61
PMFBP1Q8TBY8 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PMFBP1Q8TBY8 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PMFBP1Q8TBY8 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PMFBP1Q8TBY8 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC18.88■□□□□ 0.61
PMFBP1Q8TBY8 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
PMFBP1Q8TBY8 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
PMFBP1Q8TBY8 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PMFBP1Q8TBY8 AL031056.1-202ENST00000635954 2193 ntTSL 5 BASIC18.88■□□□□ 0.61
PMFBP1Q8TBY8 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PMFBP1Q8TBY8 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC18.88■□□□□ 0.61
PMFBP1Q8TBY8 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PMFBP1Q8TBY8 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PMFBP1Q8TBY8 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PMFBP1Q8TBY8 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
PMFBP1Q8TBY8 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
PMFBP1Q8TBY8 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
PMFBP1Q8TBY8 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC18.87■□□□□ 0.61
PMFBP1Q8TBY8 KRT37-201ENST00000225550 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PMFBP1Q8TBY8 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PMFBP1Q8TBY8 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC18.87■□□□□ 0.61
PMFBP1Q8TBY8 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PMFBP1Q8TBY8 VASH2-205ENST00000366967 1206 ntTSL 2 BASIC18.87■□□□□ 0.61
PMFBP1Q8TBY8 DPPA5-201ENST00000370370 679 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PMFBP1Q8TBY8 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PMFBP1Q8TBY8 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PMFBP1Q8TBY8 PLA2G2A-202ENST00000400520 974 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PMFBP1Q8TBY8 OR7E155P-201ENST00000412208 1014 ntBASIC18.87■□□□□ 0.61
PMFBP1Q8TBY8 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC18.87■□□□□ 0.61
PMFBP1Q8TBY8 KCNK15-AS1-203ENST00000427598 862 ntTSL 2 BASIC18.87■□□□□ 0.61
PMFBP1Q8TBY8 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PMFBP1Q8TBY8 AL773545.2-201ENST00000442149 472 ntBASIC18.87■□□□□ 0.61
PMFBP1Q8TBY8 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC18.87■□□□□ 0.61
PMFBP1Q8TBY8 EIF5A2-205ENST00000487522 565 ntTSL 3 BASIC18.87■□□□□ 0.61
PMFBP1Q8TBY8 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
PMFBP1Q8TBY8 AC132812.1-201ENST00000583145 892 ntBASIC18.87■□□□□ 0.61
PMFBP1Q8TBY8 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
PMFBP1Q8TBY8 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
PMFBP1Q8TBY8 AC080013.5-201ENST00000607044 679 ntBASIC18.87■□□□□ 0.61
PMFBP1Q8TBY8 LINC00969-253ENST00000625338 804 ntTSL 5 BASIC18.87■□□□□ 0.61
PMFBP1Q8TBY8 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PMFBP1Q8TBY8 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PMFBP1Q8TBY8 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
PMFBP1Q8TBY8 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC18.87■□□□□ 0.61
PMFBP1Q8TBY8 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
PMFBP1Q8TBY8 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PMFBP1Q8TBY8 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PMFBP1Q8TBY8 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
PMFBP1Q8TBY8 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PMFBP1Q8TBY8 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PMFBP1Q8TBY8 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PMFBP1Q8TBY8 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PMFBP1Q8TBY8 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms