Protein–RNA interactions for Protein: Q0VF96

CGNL1, Cingulin-like protein 1, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGNL1Q0VF96 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CGNL1Q0VF96 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC18.66■□□□□ 0.58
CGNL1Q0VF96 RPL15-205ENST00000415719 830 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CGNL1Q0VF96 KRT17P4-201ENST00000429445 819 ntBASIC18.66■□□□□ 0.58
CGNL1Q0VF96 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC18.66■□□□□ 0.58
CGNL1Q0VF96 KRT18P46-201ENST00000435568 1279 ntBASIC18.66■□□□□ 0.58
CGNL1Q0VF96 AL365500.1-201ENST00000442783 868 ntTSL 3 BASIC18.66■□□□□ 0.58
CGNL1Q0VF96 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC18.66■□□□□ 0.58
CGNL1Q0VF96 C9orf135-205ENST00000527647 748 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CGNL1Q0VF96 TREHP1-201ENST00000531328 465 ntBASIC18.66■□□□□ 0.58
CGNL1Q0VF96 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC18.66■□□□□ 0.58
CGNL1Q0VF96 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CGNL1Q0VF96 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC18.66■□□□□ 0.58
CGNL1Q0VF96 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC18.66■□□□□ 0.58
CGNL1Q0VF96 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CGNL1Q0VF96 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CGNL1Q0VF96 CCDC178-201ENST00000300227 3087 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
CGNL1Q0VF96 Z82195.2-202ENST00000458525 1646 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CGNL1Q0VF96 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CGNL1Q0VF96 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC18.66■□□□□ 0.58
CGNL1Q0VF96 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CGNL1Q0VF96 DDC-212ENST00000615193 1674 ntTSL 3 BASIC18.66■□□□□ 0.58
CGNL1Q0VF96 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CGNL1Q0VF96 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CGNL1Q0VF96 RIN2-202ENST00000440354 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CGNL1Q0VF96 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC18.66■□□□□ 0.58
CGNL1Q0VF96 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CGNL1Q0VF96 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
CGNL1Q0VF96 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CGNL1Q0VF96 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CGNL1Q0VF96 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CGNL1Q0VF96 FAM90A12P-201ENST00000519497 2375 ntBASIC18.65■□□□□ 0.58
CGNL1Q0VF96 FAM90A24P-201ENST00000520792 2369 ntBASIC18.65■□□□□ 0.58
CGNL1Q0VF96 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CGNL1Q0VF96 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CGNL1Q0VF96 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
CGNL1Q0VF96 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CGNL1Q0VF96 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CGNL1Q0VF96 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CGNL1Q0VF96 FLAD1-202ENST00000295530 1211 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CGNL1Q0VF96 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CGNL1Q0VF96 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CGNL1Q0VF96 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CGNL1Q0VF96 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CGNL1Q0VF96 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC18.65■□□□□ 0.58
CGNL1Q0VF96 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CGNL1Q0VF96 TCL1A-201ENST00000402399 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CGNL1Q0VF96 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC18.65■□□□□ 0.58
CGNL1Q0VF96 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC18.65■□□□□ 0.58
CGNL1Q0VF96 AC103563.1-201ENST00000429316 123 ntBASIC18.65■□□□□ 0.58
CGNL1Q0VF96 AL512288.1-201ENST00000448015 491 ntTSL 5 BASIC18.65■□□□□ 0.58
CGNL1Q0VF96 CLNS1A-211ENST00000532069 898 ntTSL 3 BASIC18.65■□□□□ 0.58
CGNL1Q0VF96 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC18.65■□□□□ 0.58
CGNL1Q0VF96 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC18.65■□□□□ 0.58
CGNL1Q0VF96 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC18.65■□□□□ 0.58
CGNL1Q0VF96 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC18.65■□□□□ 0.58
CGNL1Q0VF96 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC18.65■□□□□ 0.58
CGNL1Q0VF96 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC18.65■□□□□ 0.58
CGNL1Q0VF96 CSTP2-201ENST00000610599 398 ntBASIC18.65■□□□□ 0.58
CGNL1Q0VF96 AC073869.4-201ENST00000620841 800 ntBASIC18.65■□□□□ 0.58
CGNL1Q0VF96 AC026336.4-201ENST00000624565 1050 ntBASIC18.65■□□□□ 0.58
CGNL1Q0VF96 MIR600HG-201ENST00000449175 5984 ntBASIC18.65■□□□□ 0.58
CGNL1Q0VF96 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CGNL1Q0VF96 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CGNL1Q0VF96 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CGNL1Q0VF96 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CGNL1Q0VF96 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CGNL1Q0VF96 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CGNL1Q0VF96 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CGNL1Q0VF96 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
CGNL1Q0VF96 AC139795.2-201ENST00000499900 1751 ntTSL 2 BASIC18.64■□□□□ 0.57
CGNL1Q0VF96 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CGNL1Q0VF96 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CGNL1Q0VF96 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CGNL1Q0VF96 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CGNL1Q0VF96 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CGNL1Q0VF96 C7orf49-214ENST00000620897 1349 ntTSL 3 BASIC18.64■□□□□ 0.57
CGNL1Q0VF96 SURF4-203ENST00000371991 715 ntTSL 3 BASIC18.64■□□□□ 0.57
CGNL1Q0VF96 AP000244.1-201ENST00000424582 201 ntBASIC18.64■□□□□ 0.57
CGNL1Q0VF96 ASS1P2-201ENST00000439895 1223 ntBASIC18.64■□□□□ 0.57
CGNL1Q0VF96 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC18.64■□□□□ 0.57
CGNL1Q0VF96 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC18.64■□□□□ 0.57
CGNL1Q0VF96 LRRC75A-AS1-214ENST00000487066 763 ntTSL 3 BASIC18.64■□□□□ 0.57
CGNL1Q0VF96 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC18.64■□□□□ 0.57
CGNL1Q0VF96 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC18.64■□□□□ 0.57
CGNL1Q0VF96 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CGNL1Q0VF96 LINC00638-201ENST00000555578 2518 ntBASIC18.64■□□□□ 0.57
CGNL1Q0VF96 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CGNL1Q0VF96 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC18.64■□□□□ 0.57
CGNL1Q0VF96 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
CGNL1Q0VF96 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CGNL1Q0VF96 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CGNL1Q0VF96 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CGNL1Q0VF96 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CGNL1Q0VF96 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CGNL1Q0VF96 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
CGNL1Q0VF96 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CGNL1Q0VF96 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CGNL1Q0VF96 NCLP1-201ENST00000445357 1963 ntBASIC18.64■□□□□ 0.57
CGNL1Q0VF96 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms