Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 AC069262.1-201ENST00000539058 672 ntBASIC12.46□□□□□ -0.41
VBP1P61758 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
VBP1P61758 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC12.46□□□□□ -0.41
VBP1P61758 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC12.46□□□□□ -0.41
VBP1P61758 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC12.46□□□□□ -0.41
VBP1P61758 NRXN1-233ENST00000630543 4500 ntTSL 5 BASIC12.46□□□□□ -0.41
VBP1P61758 CCDC178-201ENST00000300227 3087 ntAPPRIS P3 TSL 2 BASIC12.46□□□□□ -0.41
VBP1P61758 TMEM136-202ENST00000375095 4143 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
VBP1P61758 USP20-201ENST00000315480 4458 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
VBP1P61758 AP1M1-203ENST00000444449 2311 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
VBP1P61758 PRAMENP-201ENST00000337471 3038 ntTSL 2 BASIC12.46□□□□□ -0.41
VBP1P61758 MYO1C-202ENST00000361007 4734 ntAPPRIS P3 TSL 5 BASIC12.46□□□□□ -0.42
VBP1P61758 OSBPL7-202ENST00000392507 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
VBP1P61758 TMEM120B-204ENST00000449592 7461 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
VBP1P61758 FGFR1-211ENST00000425967 5375 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
VBP1P61758 RAP1A-202ENST00000369709 5024 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
VBP1P61758 ESPNL-203ENST00000409506 3610 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
VBP1P61758 NOS3-203ENST00000461406 3644 ntTSL 2 BASIC12.46□□□□□ -0.42
VBP1P61758 ALK-205ENST00000618119 4646 ntTSL 5 BASIC12.46□□□□□ -0.42
VBP1P61758 DACH2-201ENST00000373125 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
VBP1P61758 STXBP1-221ENST00000637953 3925 ntTSL 5 BASIC12.46□□□□□ -0.42
VBP1P61758 NUMA1-205ENST00000393695 7343 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
VBP1P61758 EBF1-201ENST00000313708 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
VBP1P61758 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC12.46□□□□□ -0.42
VBP1P61758 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
VBP1P61758 KCTD21-AS1-207ENST00000600795 1549 ntBASIC12.46□□□□□ -0.42
VBP1P61758 EGLN3-205ENST00000547327 2849 ntBASIC12.46□□□□□ -0.42
VBP1P61758 C1QTNF9B-202ENST00000382140 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
VBP1P61758 GGTA1P-205ENST00000495328 3478 ntTSL 2 BASIC12.46□□□□□ -0.42
VBP1P61758 GDA-203ENST00000376986 1771 ntTSL 2 BASIC12.46□□□□□ -0.42
VBP1P61758 FAM161A-203ENST00000405894 3684 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
VBP1P61758 CSNK1G3-201ENST00000345990 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
VBP1P61758 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
VBP1P61758 AP000593.2-201ENST00000542775 1433 ntBASIC12.45□□□□□ -0.42
VBP1P61758 GOLGA3-201ENST00000204726 9252 ntAPPRIS P3 TSL 5 BASIC12.45□□□□□ -0.42
VBP1P61758 ATP2A3-203ENST00000359983 3290 ntTSL 5 BASIC12.45□□□□□ -0.42
VBP1P61758 FILIP1L-203ENST00000383694 3280 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
VBP1P61758 ADAM8-202ENST00000445355 3279 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
VBP1P61758 ZNF740-201ENST00000416904 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
VBP1P61758 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC12.45□□□□□ -0.42
VBP1P61758 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC12.45□□□□□ -0.42
VBP1P61758 FAM90A17P-201ENST00000533716 1957 ntBASIC12.45□□□□□ -0.42
VBP1P61758 LINC01987-201ENST00000593118 2281 ntTSL 2 BASIC12.45□□□□□ -0.42
VBP1P61758 RHOH-217ENST00000610353 2268 ntAPPRIS P1 TSL 4 BASIC12.45□□□□□ -0.42
VBP1P61758 DMBT1-201ENST00000330163 5802 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
VBP1P61758 DMBT1-206ENST00000368956 5802 ntTSL 5 BASIC12.45□□□□□ -0.42
VBP1P61758 BBOF1-201ENST00000394009 3106 ntAPPRIS P2 TSL 2 BASIC12.45□□□□□ -0.42
VBP1P61758 ANGEL2-208ENST00000535388 2517 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
VBP1P61758 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
VBP1P61758 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
VBP1P61758 NAB1-203ENST00000409641 2472 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
VBP1P61758 NLRP2-208ENST00000448584 3573 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
VBP1P61758 CAPN8-201ENST00000366872 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
VBP1P61758 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
VBP1P61758 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
VBP1P61758 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
VBP1P61758 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
VBP1P61758 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
VBP1P61758 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
VBP1P61758 PMP22-202ENST00000395936 816 ntTSL 3 BASIC12.45□□□□□ -0.42
VBP1P61758 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC12.45□□□□□ -0.42
VBP1P61758 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC12.45□□□□□ -0.42
VBP1P61758 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
VBP1P61758 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
VBP1P61758 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
VBP1P61758 AC011495.1-201ENST00000498085 584 ntBASIC12.45□□□□□ -0.42
VBP1P61758 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC12.45□□□□□ -0.42
VBP1P61758 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC12.45□□□□□ -0.42
VBP1P61758 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC12.45□□□□□ -0.42
VBP1P61758 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
VBP1P61758 AP001462.1-201ENST00000594089 452 ntBASIC12.45□□□□□ -0.42
VBP1P61758 AL390955.2-201ENST00000603032 514 ntBASIC12.45□□□□□ -0.42
VBP1P61758 AC021016.3-201ENST00000608367 477 ntBASIC12.45□□□□□ -0.42
VBP1P61758 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
VBP1P61758 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC12.45□□□□□ -0.42
VBP1P61758 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
VBP1P61758 CACNB3-204ENST00000547230 2395 ntTSL 3 BASIC12.45□□□□□ -0.42
VBP1P61758 GRIN2A-206ENST00000562109 4338 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
VBP1P61758 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
VBP1P61758 LINC00523-206ENST00000556697 2071 ntTSL 2 BASIC12.45□□□□□ -0.42
VBP1P61758 MYRIP-201ENST00000302541 5077 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
VBP1P61758 ZNF41-202ENST00000377065 4531 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
VBP1P61758 TSPEAR-201ENST00000323084 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
VBP1P61758 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
VBP1P61758 AP002986.1-201ENST00000602376 1763 ntTSL 5 BASIC12.45□□□□□ -0.42
VBP1P61758 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
VBP1P61758 LIG1-221ENST00000613670 3949 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
VBP1P61758 ACADL-201ENST00000233710 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
VBP1P61758 RAB3IP-212ENST00000550536 9646 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
VBP1P61758 PSMD11-201ENST00000261712 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
VBP1P61758 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC12.45□□□□□ -0.42
VBP1P61758 POFUT2-213ENST00000612472 2959 ntTSL 5 BASIC12.45□□□□□ -0.42
VBP1P61758 ATP7B-202ENST00000344297 5861 ntTSL 5 BASIC12.44□□□□□ -0.42
VBP1P61758 MIGA2-201ENST00000358369 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
VBP1P61758 ZNF461-201ENST00000360357 2361 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
VBP1P61758 TP53TG5-201ENST00000372726 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
VBP1P61758 POTEI-201ENST00000451531 7020 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
VBP1P61758 CCDC112-201ENST00000379611 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
VBP1P61758 CELF3-202ENST00000290585 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
VBP1P61758 STK26-204ENST00000481105 1835 ntTSL 2 BASIC12.44□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms