Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
COL15A1P39059 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
COL15A1P39059 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC17.23■□□□□ 0.35
COL15A1P39059 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
COL15A1P39059 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
COL15A1P39059 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
COL15A1P39059 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
COL15A1P39059 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
COL15A1P39059 RIBC1-202ENST00000375327 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
COL15A1P39059 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC17.23■□□□□ 0.35
COL15A1P39059 MPZL3-204ENST00000527472 1381 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
COL15A1P39059 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
COL15A1P39059 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
COL15A1P39059 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
COL15A1P39059 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
COL15A1P39059 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
COL15A1P39059 FAM213A-204ENST00000372188 829 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
COL15A1P39059 AC007383.2-201ENST00000420509 752 ntTSL 2 BASIC17.23■□□□□ 0.35
COL15A1P39059 AC007391.1-201ENST00000433893 504 ntTSL 2 BASIC17.23■□□□□ 0.35
COL15A1P39059 AC002127.2-201ENST00000444032 792 ntTSL 3 BASIC17.23■□□□□ 0.35
COL15A1P39059 CTBP2P6-201ENST00000526402 1229 ntBASIC17.23■□□□□ 0.35
COL15A1P39059 MBP-230ENST00000528160 584 ntTSL 5 BASIC17.23■□□□□ 0.35
COL15A1P39059 AP003040.1-201ENST00000532044 1024 ntBASIC17.23■□□□□ 0.35
COL15A1P39059 AP003071.1-201ENST00000567925 622 ntTSL 3 BASIC17.23■□□□□ 0.35
COL15A1P39059 USP32P3-202ENST00000583574 611 ntTSL 3 BASIC17.23■□□□□ 0.35
COL15A1P39059 SNORA50D-202ENST00000627561 132 ntBASIC17.23■□□□□ 0.35
COL15A1P39059 ABCD1P2-201ENST00000429313 1601 ntBASIC17.23■□□□□ 0.35
COL15A1P39059 AADACL4-201ENST00000376221 1575 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
COL15A1P39059 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
COL15A1P39059 ZSCAN21-203ENST00000456748 1904 ntTSL 5 BASIC17.23■□□□□ 0.35
COL15A1P39059 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
COL15A1P39059 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
COL15A1P39059 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
COL15A1P39059 ATP1B3-201ENST00000286371 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
COL15A1P39059 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
COL15A1P39059 AL513497.1-201ENST00000624273 2083 ntBASIC17.22■□□□□ 0.35
COL15A1P39059 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
COL15A1P39059 MMP19-202ENST00000409200 1431 ntTSL 2 BASIC17.22■□□□□ 0.35
COL15A1P39059 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC17.22■□□□□ 0.35
COL15A1P39059 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
COL15A1P39059 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
COL15A1P39059 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
COL15A1P39059 PRMT5-202ENST00000324366 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
COL15A1P39059 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
COL15A1P39059 CLEC10A-202ENST00000416562 1646 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
COL15A1P39059 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
COL15A1P39059 BCL2L11-203ENST00000357757 947 ntTSL 5 BASIC17.22■□□□□ 0.35
COL15A1P39059 MYL4-202ENST00000393450 855 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
COL15A1P39059 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
COL15A1P39059 AC231533.1-201ENST00000416061 925 ntTSL 3 BASIC17.22■□□□□ 0.35
COL15A1P39059 AC000077.1-201ENST00000420012 953 ntBASIC17.22■□□□□ 0.35
COL15A1P39059 ARHGEF26-AS1-203ENST00000480639 582 ntTSL 2 BASIC17.22■□□□□ 0.35
COL15A1P39059 MTHFD2P7-201ENST00000483867 983 ntBASIC17.22■□□□□ 0.35
COL15A1P39059 BLOC1S1-203ENST00000548925 571 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
COL15A1P39059 AC005993.1-201ENST00000555581 397 ntTSL 5 BASIC17.22■□□□□ 0.35
COL15A1P39059 AL353997.6-201ENST00000583394 621 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
COL15A1P39059 IFITM2-205ENST00000602569 605 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
COL15A1P39059 CR392039.1-201ENST00000623217 204 ntBASIC17.22■□□□□ 0.35
COL15A1P39059 SFTPA2-205ENST00000640627 195 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
COL15A1P39059 MUC1-225ENST00000612778 1836 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
COL15A1P39059 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
COL15A1P39059 EFHB-202ENST00000344838 2389 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
COL15A1P39059 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
COL15A1P39059 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC17.22■□□□□ 0.35
COL15A1P39059 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC17.22■□□□□ 0.35
COL15A1P39059 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC17.22■□□□□ 0.35
COL15A1P39059 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
COL15A1P39059 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
COL15A1P39059 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
COL15A1P39059 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
COL15A1P39059 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
COL15A1P39059 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
COL15A1P39059 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
COL15A1P39059 AC111170.3-201ENST00000624282 2464 ntBASIC17.22■□□□□ 0.35
COL15A1P39059 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC17.22■□□□□ 0.35
COL15A1P39059 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
COL15A1P39059 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC17.22■□□□□ 0.35
COL15A1P39059 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
COL15A1P39059 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
COL15A1P39059 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
COL15A1P39059 LINC02433-202ENST00000507108 1395 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
COL15A1P39059 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC17.21■□□□□ 0.35
COL15A1P39059 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
COL15A1P39059 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC17.21■□□□□ 0.35
COL15A1P39059 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
COL15A1P39059 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
COL15A1P39059 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
COL15A1P39059 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
COL15A1P39059 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
COL15A1P39059 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC17.21■□□□□ 0.35
COL15A1P39059 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC17.21■□□□□ 0.35
COL15A1P39059 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
COL15A1P39059 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
COL15A1P39059 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
COL15A1P39059 IGLJ1-201ENST00000390320 127 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
COL15A1P39059 RHOQP2-201ENST00000449922 579 ntBASIC17.21■□□□□ 0.35
COL15A1P39059 SNRPD2P2-201ENST00000473818 333 ntBASIC17.21■□□□□ 0.35
COL15A1P39059 CRYBB2P1-204ENST00000509460 701 ntTSL 3 BASIC17.21■□□□□ 0.35
COL15A1P39059 AP000640.1-201ENST00000525337 879 ntTSL 2 BASIC17.21■□□□□ 0.35
COL15A1P39059 LINC00677-201ENST00000558224 486 ntTSL 3 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms