Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 ARAF-202ENST00000377039 1271 ntTSL 2 BASIC13.81□□□□□ -0.2
VARSP26640 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
VARSP26640 RPS20P25-201ENST00000412447 352 ntBASIC13.81□□□□□ -0.2
VARSP26640 AC078875.1-201ENST00000431907 724 ntBASIC13.81□□□□□ -0.2
VARSP26640 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC13.81□□□□□ -0.2
VARSP26640 NKAIN1P1-201ENST00000435754 582 ntBASIC13.81□□□□□ -0.2
VARSP26640 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC13.81□□□□□ -0.2
VARSP26640 MSRA-203ENST00000441698 788 ntTSL 2 BASIC13.81□□□□□ -0.2
VARSP26640 LDHBP1-201ENST00000455730 1119 ntBASIC13.81□□□□□ -0.2
VARSP26640 RN7SL11P-201ENST00000471305 293 ntBASIC13.81□□□□□ -0.2
VARSP26640 TSACC-208ENST00000481479 741 ntTSL 2 BASIC13.81□□□□□ -0.2
VARSP26640 IMP3P2-201ENST00000489760 475 ntBASIC13.81□□□□□ -0.2
VARSP26640 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC13.81□□□□□ -0.2
VARSP26640 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC13.81□□□□□ -0.2
VARSP26640 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC13.81□□□□□ -0.2
VARSP26640 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC13.81□□□□□ -0.2
VARSP26640 AL161670.2-201ENST00000557650 1227 ntBASIC13.81□□□□□ -0.2
VARSP26640 AC140658.4-201ENST00000561990 352 ntBASIC13.81□□□□□ -0.2
VARSP26640 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC13.81□□□□□ -0.2
VARSP26640 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC13.81□□□□□ -0.2
VARSP26640 MIR7845-201ENST00000618396 99 ntBASIC13.81□□□□□ -0.2
VARSP26640 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC13.81□□□□□ -0.2
VARSP26640 SLC4A2-201ENST00000392826 3947 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
VARSP26640 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
VARSP26640 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
VARSP26640 LPO-204ENST00000543544 2350 ntTSL 2 BASIC13.81□□□□□ -0.2
VARSP26640 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VARSP26640 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC13.81□□□□□ -0.2
VARSP26640 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
VARSP26640 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
VARSP26640 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC13.81□□□□□ -0.2
VARSP26640 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC13.81□□□□□ -0.2
VARSP26640 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VARSP26640 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VARSP26640 GOLGA8IP-202ENST00000611635 2100 ntBASIC13.81□□□□□ -0.2
VARSP26640 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC13.81□□□□□ -0.2
VARSP26640 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
VARSP26640 TRPV1-209ENST00000576351 2525 ntTSL 5 BASIC13.81□□□□□ -0.2
VARSP26640 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VARSP26640 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VARSP26640 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
VARSP26640 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC13.8□□□□□ -0.2
VARSP26640 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC13.8□□□□□ -0.2
VARSP26640 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VARSP26640 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VARSP26640 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC13.8□□□□□ -0.2
VARSP26640 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
VARSP26640 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VARSP26640 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
VARSP26640 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC13.8□□□□□ -0.2
VARSP26640 RTN1-203ENST00000395090 1609 ntTSL 2 BASIC13.8□□□□□ -0.2
VARSP26640 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VARSP26640 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC13.8□□□□□ -0.2
VARSP26640 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC13.8□□□□□ -0.2
VARSP26640 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
VARSP26640 JTB-202ENST00000356648 1040 ntTSL 2 BASIC13.8□□□□□ -0.2
VARSP26640 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VARSP26640 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
VARSP26640 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC13.8□□□□□ -0.2
VARSP26640 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC13.8□□□□□ -0.2
VARSP26640 SMIM26-201ENST00000411646 505 ntAPPRIS P5 TSL 1 (best) BASIC13.8□□□□□ -0.2
VARSP26640 SMIM26-202ENST00000435844 575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
VARSP26640 AC099542.2-201ENST00000474149 553 ntTSL 2 BASIC13.8□□□□□ -0.2
VARSP26640 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC13.8□□□□□ -0.2
VARSP26640 AC009779.1-201ENST00000551138 283 ntBASIC13.8□□□□□ -0.2
VARSP26640 AL512310.5-201ENST00000551999 515 ntBASIC13.8□□□□□ -0.2
VARSP26640 CSH2-206ENST00000560142 749 ntTSL 5 BASIC13.8□□□□□ -0.2
VARSP26640 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC13.8□□□□□ -0.2
VARSP26640 PAM16-211ENST00000575848 518 ntTSL 3 BASIC13.8□□□□□ -0.2
VARSP26640 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
VARSP26640 NAT9-224ENST00000583757 583 ntTSL 3 BASIC13.8□□□□□ -0.2
VARSP26640 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC13.8□□□□□ -0.2
VARSP26640 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC13.8□□□□□ -0.2
VARSP26640 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
VARSP26640 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC13.8□□□□□ -0.2
VARSP26640 AC097724.1-201ENST00000609581 426 ntBASIC13.8□□□□□ -0.2
VARSP26640 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC13.8□□□□□ -0.2
VARSP26640 AC134407.3-201ENST00000624035 2139 ntBASIC13.8□□□□□ -0.2
VARSP26640 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VARSP26640 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC13.8□□□□□ -0.2
VARSP26640 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VARSP26640 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
VARSP26640 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VARSP26640 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VARSP26640 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
VARSP26640 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
VARSP26640 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
VARSP26640 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VARSP26640 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
VARSP26640 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
VARSP26640 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
VARSP26640 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
VARSP26640 VSTM2A-201ENST00000302287 3401 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
VARSP26640 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
VARSP26640 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC13.8□□□□□ -0.2
VARSP26640 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
VARSP26640 TBC1D3P2-203ENST00000581291 2088 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
VARSP26640 AC135782.3-201ENST00000562782 2105 ntBASIC13.79□□□□□ -0.2
VARSP26640 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VARSP26640 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms