Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC11.94□□□□□ -0.5
CD40P25942 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
CD40P25942 COQ4-204ENST00000608951 781 ntTSL 2 BASIC11.94□□□□□ -0.5
CD40P25942 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CD40P25942 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC11.94□□□□□ -0.5
CD40P25942 HLA-C-210ENST00000640219 976 ntBASIC11.94□□□□□ -0.5
CD40P25942 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CD40P25942 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CD40P25942 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CD40P25942 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
CD40P25942 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC11.94□□□□□ -0.5
CD40P25942 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CD40P25942 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CD40P25942 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CD40P25942 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CD40P25942 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
CD40P25942 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
CD40P25942 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
CD40P25942 Z98885.3-201ENST00000624882 1757 ntBASIC11.94□□□□□ -0.5
CD40P25942 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CD40P25942 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
CD40P25942 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
CD40P25942 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
CD40P25942 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
CD40P25942 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC11.94□□□□□ -0.5
CD40P25942 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC11.94□□□□□ -0.5
CD40P25942 RET-205ENST00000615310 4337 ntTSL 5 BASIC11.94□□□□□ -0.5
CD40P25942 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
CD40P25942 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC11.94□□□□□ -0.5
CD40P25942 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
CD40P25942 AC040160.2-201ENST00000623816 1675 ntBASIC11.94□□□□□ -0.5
CD40P25942 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CD40P25942 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
CD40P25942 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CD40P25942 SON-203ENST00000381679 7860 ntTSL 5 BASIC11.93□□□□□ -0.5
CD40P25942 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CD40P25942 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
CD40P25942 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC11.93□□□□□ -0.5
CD40P25942 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC11.93□□□□□ -0.5
CD40P25942 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CD40P25942 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CD40P25942 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC11.93□□□□□ -0.5
CD40P25942 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC11.93□□□□□ -0.5
CD40P25942 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CD40P25942 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
CD40P25942 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
CD40P25942 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CD40P25942 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CD40P25942 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC11.93□□□□□ -0.5
CD40P25942 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CD40P25942 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
CD40P25942 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CD40P25942 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC11.93□□□□□ -0.5
CD40P25942 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC11.93□□□□□ -0.5
CD40P25942 AC020763.3-201ENST00000625095 2904 ntBASIC11.93□□□□□ -0.5
CD40P25942 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CD40P25942 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
CD40P25942 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CD40P25942 MAL-204ENST00000354078 831 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CD40P25942 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CD40P25942 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC11.93□□□□□ -0.5
CD40P25942 BCAS2P2-201ENST00000425064 674 ntBASIC11.93□□□□□ -0.5
CD40P25942 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
CD40P25942 GCSHP3-201ENST00000431120 391 ntBASIC11.93□□□□□ -0.5
CD40P25942 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC11.93□□□□□ -0.5
CD40P25942 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC11.93□□□□□ -0.5
CD40P25942 LIAS-205ENST00000509519 1005 ntTSL 2 BASIC11.93□□□□□ -0.5
CD40P25942 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC11.93□□□□□ -0.5
CD40P25942 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
CD40P25942 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
CD40P25942 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC11.93□□□□□ -0.5
CD40P25942 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC11.93□□□□□ -0.5
CD40P25942 DLK1-205ENST00000556051 469 ntTSL 2 BASIC11.93□□□□□ -0.5
CD40P25942 MT3-202ENST00000561640 514 ntTSL 3 BASIC11.93□□□□□ -0.5
CD40P25942 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CD40P25942 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC11.93□□□□□ -0.5
CD40P25942 AC244517.3-201ENST00000616254 1235 ntBASIC11.93□□□□□ -0.5
CD40P25942 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC11.93□□□□□ -0.5
CD40P25942 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC11.93□□□□□ -0.5
CD40P25942 AGAP10P-201ENST00000454844 2418 ntBASIC11.93□□□□□ -0.5
CD40P25942 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC11.93□□□□□ -0.5
CD40P25942 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
CD40P25942 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CD40P25942 TP73-201ENST00000346387 4854 ntTSL 5 BASIC11.93□□□□□ -0.5
CD40P25942 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CD40P25942 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CD40P25942 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CD40P25942 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
CD40P25942 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC11.93□□□□□ -0.5
CD40P25942 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CD40P25942 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
CD40P25942 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CD40P25942 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CD40P25942 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC11.93□□□□□ -0.5
CD40P25942 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CD40P25942 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
CD40P25942 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
CD40P25942 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
CD40P25942 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CD40P25942 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC11.93□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms