Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC14.13□□□□□ -0.15
NFKB1P19838 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NFKB1P19838 RCC2P5-201ENST00000492126 1487 ntBASIC14.13□□□□□ -0.15
NFKB1P19838 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NFKB1P19838 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NFKB1P19838 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NFKB1P19838 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
NFKB1P19838 PES1P2-201ENST00000449745 1735 ntBASIC14.13□□□□□ -0.15
NFKB1P19838 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC14.13□□□□□ -0.15
NFKB1P19838 FAM90A2P-201ENST00000511144 1395 ntBASIC14.13□□□□□ -0.15
NFKB1P19838 FAM90A25P-201ENST00000528404 1395 ntBASIC14.13□□□□□ -0.15
NFKB1P19838 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC14.13□□□□□ -0.15
NFKB1P19838 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NFKB1P19838 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NFKB1P19838 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NFKB1P19838 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NFKB1P19838 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NFKB1P19838 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NFKB1P19838 MIR557-201ENST00000385239 98 ntBASIC14.13□□□□□ -0.15
NFKB1P19838 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NFKB1P19838 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC14.13□□□□□ -0.15
NFKB1P19838 AC136604.1-202ENST00000425471 771 ntBASIC14.13□□□□□ -0.15
NFKB1P19838 RPL8P2-201ENST00000430538 502 ntBASIC14.13□□□□□ -0.15
NFKB1P19838 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC14.13□□□□□ -0.15
NFKB1P19838 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC14.13□□□□□ -0.15
NFKB1P19838 AC007279.1-201ENST00000448547 837 ntBASIC14.13□□□□□ -0.15
NFKB1P19838 AP000358.1-201ENST00000456260 156 ntBASIC14.13□□□□□ -0.15
NFKB1P19838 RN7SL788P-201ENST00000460504 316 ntBASIC14.13□□□□□ -0.15
NFKB1P19838 RN7SL67P-201ENST00000492147 296 ntBASIC14.13□□□□□ -0.15
NFKB1P19838 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC14.13□□□□□ -0.15
NFKB1P19838 RN7SL665P-201ENST00000578793 300 ntBASIC14.13□□□□□ -0.15
NFKB1P19838 MIR3677-201ENST00000578964 60 ntBASIC14.13□□□□□ -0.15
NFKB1P19838 AC009145.4-201ENST00000625119 1294 ntBASIC14.13□□□□□ -0.15
NFKB1P19838 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC14.13□□□□□ -0.15
NFKB1P19838 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
NFKB1P19838 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC14.13□□□□□ -0.15
NFKB1P19838 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NFKB1P19838 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
NFKB1P19838 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NFKB1P19838 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NFKB1P19838 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NFKB1P19838 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NFKB1P19838 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
NFKB1P19838 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC14.13□□□□□ -0.15
NFKB1P19838 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NFKB1P19838 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NFKB1P19838 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
NFKB1P19838 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
NFKB1P19838 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
NFKB1P19838 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
NFKB1P19838 AC125807.2-201ENST00000513358 3514 ntBASIC14.12□□□□□ -0.15
NFKB1P19838 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC14.12□□□□□ -0.15
NFKB1P19838 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC14.12□□□□□ -0.15
NFKB1P19838 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NFKB1P19838 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
NFKB1P19838 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NFKB1P19838 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
NFKB1P19838 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NFKB1P19838 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC14.12□□□□□ -0.15
NFKB1P19838 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
NFKB1P19838 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
NFKB1P19838 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC14.12□□□□□ -0.15
NFKB1P19838 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC14.12□□□□□ -0.15
NFKB1P19838 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NFKB1P19838 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NFKB1P19838 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NFKB1P19838 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NFKB1P19838 FAM213A-204ENST00000372188 829 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
NFKB1P19838 SAT1-201ENST00000379251 801 ntTSL 2 BASIC14.12□□□□□ -0.15
NFKB1P19838 SAT1-202ENST00000379253 909 ntTSL 2 BASIC14.12□□□□□ -0.15
NFKB1P19838 SAT1-203ENST00000379254 868 ntTSL 3 BASIC14.12□□□□□ -0.15
NFKB1P19838 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NFKB1P19838 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
NFKB1P19838 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC14.12□□□□□ -0.15
NFKB1P19838 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NFKB1P19838 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NFKB1P19838 AL807761.2-201ENST00000422849 729 ntBASIC14.12□□□□□ -0.15
NFKB1P19838 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC14.12□□□□□ -0.15
NFKB1P19838 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC14.12□□□□□ -0.15
NFKB1P19838 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NFKB1P19838 NEU3-202ENST00000526068 431 ntTSL 2 BASIC14.12□□□□□ -0.15
NFKB1P19838 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC14.12□□□□□ -0.15
NFKB1P19838 AC145285.5-201ENST00000562217 361 ntBASIC14.12□□□□□ -0.15
NFKB1P19838 MIR3940-201ENST00000579148 102 ntBASIC14.12□□□□□ -0.15
NFKB1P19838 MIR3619-201ENST00000579667 83 ntBASIC14.12□□□□□ -0.15
NFKB1P19838 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC14.12□□□□□ -0.15
NFKB1P19838 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
NFKB1P19838 AL353770.1-201ENST00000614915 403 ntBASIC14.12□□□□□ -0.15
NFKB1P19838 AC007718.1-201ENST00000621078 280 ntBASIC14.12□□□□□ -0.15
NFKB1P19838 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC14.12□□□□□ -0.15
NFKB1P19838 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NFKB1P19838 APOL5-201ENST00000249044 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NFKB1P19838 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC14.12□□□□□ -0.15
NFKB1P19838 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC14.12□□□□□ -0.15
NFKB1P19838 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
NFKB1P19838 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC14.12□□□□□ -0.15
NFKB1P19838 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NFKB1P19838 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NFKB1P19838 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
NFKB1P19838 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms