Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC14.05□□□□□ -0.16
VCLP18206 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VCLP18206 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC14.05□□□□□ -0.16
VCLP18206 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
VCLP18206 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VCLP18206 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VCLP18206 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
VCLP18206 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VCLP18206 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
VCLP18206 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
VCLP18206 TP73-211ENST00000604074 4806 ntTSL 5 BASIC14.04□□□□□ -0.16
VCLP18206 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
VCLP18206 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VCLP18206 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC14.04□□□□□ -0.16
VCLP18206 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
VCLP18206 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VCLP18206 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
VCLP18206 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
VCLP18206 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
VCLP18206 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC14.04□□□□□ -0.16
VCLP18206 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VCLP18206 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
VCLP18206 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VCLP18206 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
VCLP18206 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
VCLP18206 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VCLP18206 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VCLP18206 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC14.04□□□□□ -0.16
VCLP18206 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
VCLP18206 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC14.04□□□□□ -0.16
VCLP18206 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VCLP18206 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
VCLP18206 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VCLP18206 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
VCLP18206 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VCLP18206 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
VCLP18206 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
VCLP18206 AP000437.1-201ENST00000624057 2085 ntBASIC14.04□□□□□ -0.16
VCLP18206 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VCLP18206 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
VCLP18206 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC14.04□□□□□ -0.16
VCLP18206 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC14.04□□□□□ -0.16
VCLP18206 BANF1P3-201ENST00000412556 261 ntBASIC14.04□□□□□ -0.16
VCLP18206 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
VCLP18206 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC14.04□□□□□ -0.16
VCLP18206 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC14.04□□□□□ -0.16
VCLP18206 RN7SL769P-201ENST00000469386 295 ntBASIC14.04□□□□□ -0.16
VCLP18206 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC14.04□□□□□ -0.16
VCLP18206 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC14.04□□□□□ -0.16
VCLP18206 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
VCLP18206 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VCLP18206 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC14.04□□□□□ -0.16
VCLP18206 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC14.04□□□□□ -0.16
VCLP18206 AC242376.1-201ENST00000559033 726 ntBASIC14.04□□□□□ -0.16
VCLP18206 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC14.04□□□□□ -0.16
VCLP18206 FGFR3P5-201ENST00000564496 886 ntBASIC14.04□□□□□ -0.16
VCLP18206 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
VCLP18206 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC14.04□□□□□ -0.16
VCLP18206 HPN-206ENST00000597419 1212 ntTSL 5 BASIC14.04□□□□□ -0.16
VCLP18206 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC14.04□□□□□ -0.16
VCLP18206 AC012044.1-201ENST00000603431 297 ntBASIC14.04□□□□□ -0.16
VCLP18206 AC106872.11-201ENST00000605838 421 ntBASIC14.04□□□□□ -0.16
VCLP18206 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
VCLP18206 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
VCLP18206 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
VCLP18206 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC14.04□□□□□ -0.16
VCLP18206 CICP1-201ENST00000416803 2410 ntBASIC14.04□□□□□ -0.16
VCLP18206 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC14.04□□□□□ -0.16
VCLP18206 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VCLP18206 Z83844.1-201ENST00000455236 4904 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
VCLP18206 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
VCLP18206 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
VCLP18206 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VCLP18206 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC14.04□□□□□ -0.16
VCLP18206 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
VCLP18206 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC14.03□□□□□ -0.16
VCLP18206 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
VCLP18206 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
VCLP18206 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
VCLP18206 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VCLP18206 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
VCLP18206 RAB37-205ENST00000392614 2704 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
VCLP18206 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VCLP18206 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
VCLP18206 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
VCLP18206 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
VCLP18206 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VCLP18206 FP325330.2-201ENST00000624219 5630 ntBASIC14.03□□□□□ -0.16
VCLP18206 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VCLP18206 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VCLP18206 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC14.03□□□□□ -0.16
VCLP18206 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VCLP18206 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC14.03□□□□□ -0.16
VCLP18206 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
VCLP18206 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC14.03□□□□□ -0.16
VCLP18206 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC14.03□□□□□ -0.16
VCLP18206 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC14.03□□□□□ -0.16
VCLP18206 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC14.03□□□□□ -0.16
VCLP18206 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC14.03□□□□□ -0.16
VCLP18206 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms