Protein–RNA interactions for Protein: P07951

TPM2, Tropomyosin beta chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2P07951 LINC01165-201ENST00000445190 1623 ntBASIC15.9■□□□□ 0.14
TPM2P07951 AC087164.2-201ENST00000624514 3130 ntBASIC15.9■□□□□ 0.14
TPM2P07951 NLRP2-202ENST00000339757 3422 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
TPM2P07951 FAM198B-207ENST00000592057 3425 ntTSL 2 BASIC15.9■□□□□ 0.14
TPM2P07951 CTNNB1-201ENST00000349496 3737 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TPM2P07951 GRIP2-206ENST00000637182 3727 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
TPM2P07951 GNPNAT1-201ENST00000216410 3860 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TPM2P07951 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC15.9■□□□□ 0.14
TPM2P07951 DLGAP2-201ENST00000421627 3165 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
TPM2P07951 NUF2-201ENST00000271452 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TPM2P07951 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC15.89■□□□□ 0.13
TPM2P07951 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TPM2P07951 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TPM2P07951 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC15.89■□□□□ 0.13
TPM2P07951 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
TPM2P07951 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TPM2P07951 SEPT10-202ENST00000397712 3071 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TPM2P07951 DYSF-203ENST00000409366 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TPM2P07951 DYSF-205ENST00000409651 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TPM2P07951 AL583810.2-201ENST00000556430 3254 ntBASIC15.89■□□□□ 0.13
TPM2P07951 AC005696.4-201ENST00000614400 3147 ntBASIC15.89■□□□□ 0.13
TPM2P07951 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
TPM2P07951 KLK2-202ENST00000358049 2847 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TPM2P07951 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC15.89■□□□□ 0.13
TPM2P07951 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC15.89■□□□□ 0.13
TPM2P07951 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC15.89■□□□□ 0.13
TPM2P07951 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC15.89■□□□□ 0.13
TPM2P07951 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
TPM2P07951 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TPM2P07951 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TPM2P07951 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TPM2P07951 SNX21-203ENST00000372541 771 ntTSL 2 BASIC15.89■□□□□ 0.13
TPM2P07951 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC15.89■□□□□ 0.13
TPM2P07951 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TPM2P07951 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC15.89■□□□□ 0.13
TPM2P07951 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC15.89■□□□□ 0.13
TPM2P07951 AL590640.2-201ENST00000457038 527 ntBASIC15.89■□□□□ 0.13
TPM2P07951 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC15.89■□□□□ 0.13
TPM2P07951 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC15.89■□□□□ 0.13
TPM2P07951 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC15.89■□□□□ 0.13
TPM2P07951 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC15.89■□□□□ 0.13
TPM2P07951 RPL28-206ENST00000558752 671 ntTSL 3 BASIC15.89■□□□□ 0.13
TPM2P07951 MIR4683-201ENST00000579659 81 ntBASIC15.89■□□□□ 0.13
TPM2P07951 GNRHR2-203ENST00000581100 1187 ntBASIC15.89■□□□□ 0.13
TPM2P07951 RN7SL713P-201ENST00000582127 302 ntBASIC15.89■□□□□ 0.13
TPM2P07951 AC010503.4-201ENST00000615487 688 ntBASIC15.89■□□□□ 0.13
TPM2P07951 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC15.89■□□□□ 0.13
TPM2P07951 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC15.89■□□□□ 0.13
TPM2P07951 CIZ1-205ENST00000372948 2858 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
TPM2P07951 PES1-205ENST00000405677 2708 ntTSL 2 BASIC15.89■□□□□ 0.13
TPM2P07951 NTM-206ENST00000427481 2583 ntTSL 5 BASIC15.89■□□□□ 0.13
TPM2P07951 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TPM2P07951 TTC39B-201ENST00000297615 3053 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
TPM2P07951 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TPM2P07951 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TPM2P07951 PASK-203ENST00000403638 5161 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TPM2P07951 SH3KBP1-202ENST00000379698 2678 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TPM2P07951 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
TPM2P07951 GLO1-201ENST00000373365 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TPM2P07951 ANKRD36B-204ENST00000438709 6067 ntTSL 5 BASIC15.89■□□□□ 0.13
TPM2P07951 PPP1R12A-201ENST00000261207 5582 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
TPM2P07951 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC15.89■□□□□ 0.13
TPM2P07951 SMIM27-203ENST00000451672 2382 ntAPPRIS ALT2 BASIC15.89■□□□□ 0.13
TPM2P07951 CU639417.6-202ENST00000624872 3241 ntTSL 5 BASIC15.89■□□□□ 0.13
TPM2P07951 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TPM2P07951 CPA5-208ENST00000485477 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TPM2P07951 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TPM2P07951 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TPM2P07951 DPAGT1-217ENST00000639704 1719 ntTSL 5 BASIC15.88■□□□□ 0.13
TPM2P07951 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
TPM2P07951 AC011481.3-201ENST00000623895 5594 ntBASIC15.88■□□□□ 0.13
TPM2P07951 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TPM2P07951 A1CF-204ENST00000373997 2116 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TPM2P07951 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TPM2P07951 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC15.88■□□□□ 0.13
TPM2P07951 LGR6-203ENST00000367278 3567 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TPM2P07951 NSUN4-204ENST00000474844 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TPM2P07951 AL358334.2-201ENST00000553648 4714 ntTSL 2 BASIC15.88■□□□□ 0.13
TPM2P07951 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TPM2P07951 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TPM2P07951 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC15.88■□□□□ 0.13
TPM2P07951 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TPM2P07951 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
TPM2P07951 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TPM2P07951 AC016694.1-201ENST00000434179 700 ntBASIC15.88■□□□□ 0.13
TPM2P07951 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC15.88■□□□□ 0.13
TPM2P07951 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC15.88■□□□□ 0.13
TPM2P07951 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC15.88■□□□□ 0.13
TPM2P07951 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC15.88■□□□□ 0.13
TPM2P07951 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC15.88■□□□□ 0.13
TPM2P07951 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC15.88■□□□□ 0.13
TPM2P07951 LARP4-220ENST00000615080 856 ntTSL 5 BASIC15.88■□□□□ 0.13
TPM2P07951 BAP1-211ENST00000615113 489 ntBASIC15.88■□□□□ 0.13
TPM2P07951 AC138951.2-201ENST00000623455 1161 ntBASIC15.88■□□□□ 0.13
TPM2P07951 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TPM2P07951 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TPM2P07951 PRKCE-201ENST00000306156 5650 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TPM2P07951 CES1-201ENST00000360526 2006 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
TPM2P07951 INF2-202ENST00000330634 7578 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
TPM2P07951 KLC4-203ENST00000394056 2770 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms