Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC14□□□□□ -0.17
RETP07949 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
RETP07949 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
RETP07949 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
RETP07949 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC14□□□□□ -0.17
RETP07949 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14□□□□□ -0.17
RETP07949 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RETP07949 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC14□□□□□ -0.17
RETP07949 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
RETP07949 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC14□□□□□ -0.17
RETP07949 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC14□□□□□ -0.17
RETP07949 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RETP07949 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC14□□□□□ -0.17
RETP07949 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RETP07949 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RETP07949 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
RETP07949 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC14□□□□□ -0.17
RETP07949 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC13.99□□□□□ -0.17
RETP07949 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RETP07949 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
RETP07949 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC13.99□□□□□ -0.17
RETP07949 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC13.99□□□□□ -0.17
RETP07949 AC062028.1-201ENST00000536743 1422 ntTSL 5 BASIC13.99□□□□□ -0.17
RETP07949 AC138761.6-201ENST00000583997 1423 ntBASIC13.99□□□□□ -0.17
RETP07949 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RETP07949 ATP5A1-215ENST00000590665 1793 ntTSL 2 BASIC13.99□□□□□ -0.17
RETP07949 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RETP07949 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
RETP07949 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RETP07949 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
RETP07949 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RETP07949 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
RETP07949 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC13.99□□□□□ -0.17
RETP07949 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RETP07949 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
RETP07949 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
RETP07949 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC13.99□□□□□ -0.17
RETP07949 GOLGA6L16P-201ENST00000441780 1299 ntBASIC13.99□□□□□ -0.17
RETP07949 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RETP07949 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC13.99□□□□□ -0.17
RETP07949 C21orf62-204ENST00000490358 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RETP07949 EEF1GP8-201ENST00000506566 1154 ntBASIC13.99□□□□□ -0.17
RETP07949 SEPHS2P1-201ENST00000511618 1162 ntBASIC13.99□□□□□ -0.17
RETP07949 AC100858.1-201ENST00000514059 1228 ntBASIC13.99□□□□□ -0.17
RETP07949 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC13.99□□□□□ -0.17
RETP07949 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RETP07949 KLF17P1-201ENST00000547105 1126 ntBASIC13.99□□□□□ -0.17
RETP07949 AC009163.5-202ENST00000571737 466 ntTSL 3 BASIC13.99□□□□□ -0.17
RETP07949 TNFRSF12A-204ENST00000573001 648 ntTSL 3 BASIC13.99□□□□□ -0.17
RETP07949 MIR4254-201ENST00000581063 76 ntBASIC13.99□□□□□ -0.17
RETP07949 MIR4265-201ENST00000582152 99 ntBASIC13.99□□□□□ -0.17
RETP07949 AC008906.2-201ENST00000606656 474 ntTSL 2 BASIC13.99□□□□□ -0.17
RETP07949 CR392039.1-201ENST00000623217 204 ntBASIC13.99□□□□□ -0.17
RETP07949 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
RETP07949 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
RETP07949 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RETP07949 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
RETP07949 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RETP07949 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RETP07949 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RETP07949 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC13.99□□□□□ -0.17
RETP07949 MAD2L1BP-202ENST00000451025 1517 ntTSL 2 BASIC13.99□□□□□ -0.17
RETP07949 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
RETP07949 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC13.99□□□□□ -0.17
RETP07949 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
RETP07949 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
RETP07949 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RETP07949 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RETP07949 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RETP07949 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
RETP07949 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RETP07949 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RETP07949 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RETP07949 AC067931.2-201ENST00000623655 2003 ntBASIC13.98□□□□□ -0.17
RETP07949 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
RETP07949 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RETP07949 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
RETP07949 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC13.98□□□□□ -0.17
RETP07949 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
RETP07949 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.98□□□□□ -0.17
RETP07949 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
RETP07949 EZH2-202ENST00000350995 2477 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RETP07949 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
RETP07949 AC023794.5-201ENST00000564380 2157 ntBASIC13.98□□□□□ -0.17
RETP07949 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
RETP07949 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RETP07949 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
RETP07949 MRPL35-201ENST00000254644 1061 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RETP07949 PCBD1-201ENST00000299299 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RETP07949 IFNLR1-204ENST00000374419 953 ntTSL 5 BASIC13.98□□□□□ -0.17
RETP07949 HIST1H4B-201ENST00000377745 438 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
RETP07949 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RETP07949 TRBV5-7-201ENST00000390378 343 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
RETP07949 WASIR1-201ENST00000399966 1054 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RETP07949 FAM21EP-201ENST00000417804 985 ntBASIC13.98□□□□□ -0.17
RETP07949 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
RETP07949 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC13.98□□□□□ -0.17
RETP07949 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RETP07949 GLUD1P3-201ENST00000507952 896 ntTSL 2 BASIC13.98□□□□□ -0.17
RETP07949 LINC00301-203ENST00000527161 749 ntTSL 2 BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms