Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC12.45□□□□□ -0.42
CNOT4O95628 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC12.45□□□□□ -0.42
CNOT4O95628 SLC25A15P3-201ENST00000505530 290 ntBASIC12.45□□□□□ -0.42
CNOT4O95628 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC12.45□□□□□ -0.42
CNOT4O95628 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC12.45□□□□□ -0.42
CNOT4O95628 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
CNOT4O95628 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CNOT4O95628 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC12.45□□□□□ -0.42
CNOT4O95628 AC138701.2-201ENST00000553634 226 ntBASIC12.45□□□□□ -0.42
CNOT4O95628 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
CNOT4O95628 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC12.45□□□□□ -0.42
CNOT4O95628 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC12.45□□□□□ -0.42
CNOT4O95628 WT1-AS_6.1-201ENST00000614919 121 ntBASIC12.45□□□□□ -0.42
CNOT4O95628 BAP1-211ENST00000615113 489 ntBASIC12.45□□□□□ -0.42
CNOT4O95628 AC009084.3-201ENST00000623356 437 ntBASIC12.45□□□□□ -0.42
CNOT4O95628 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CNOT4O95628 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CNOT4O95628 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC12.45□□□□□ -0.42
CNOT4O95628 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CNOT4O95628 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CNOT4O95628 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CNOT4O95628 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
CNOT4O95628 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CNOT4O95628 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
CNOT4O95628 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CNOT4O95628 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CNOT4O95628 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
CNOT4O95628 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
CNOT4O95628 ITSN1-208ENST00000399349 5191 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CNOT4O95628 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CNOT4O95628 TECTA-201ENST00000264037 6468 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CNOT4O95628 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
CNOT4O95628 CACNA1G-222ENST00000510366 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
CNOT4O95628 CACNA1G-227ENST00000513964 6735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
CNOT4O95628 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CNOT4O95628 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CNOT4O95628 AC005562.1-201ENST00000583030 3219 ntBASIC12.45□□□□□ -0.42
CNOT4O95628 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC12.45□□□□□ -0.42
CNOT4O95628 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CNOT4O95628 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
CNOT4O95628 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CNOT4O95628 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
CNOT4O95628 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CNOT4O95628 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
CNOT4O95628 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CNOT4O95628 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC12.44□□□□□ -0.42
CNOT4O95628 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC12.44□□□□□ -0.42
CNOT4O95628 CACNA1G-211ENST00000503485 6768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
CNOT4O95628 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
CNOT4O95628 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
CNOT4O95628 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
CNOT4O95628 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CNOT4O95628 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CNOT4O95628 USP39-207ENST00000450066 2086 ntTSL 2 BASIC12.44□□□□□ -0.42
CNOT4O95628 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
CNOT4O95628 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CNOT4O95628 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CNOT4O95628 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC12.44□□□□□ -0.42
CNOT4O95628 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CNOT4O95628 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
CNOT4O95628 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CNOT4O95628 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC12.44□□□□□ -0.42
CNOT4O95628 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
CNOT4O95628 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC12.44□□□□□ -0.42
CNOT4O95628 AL627422.1-201ENST00000434104 580 ntBASIC12.44□□□□□ -0.42
CNOT4O95628 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CNOT4O95628 NDUFS6P1-201ENST00000485187 316 ntBASIC12.44□□□□□ -0.42
CNOT4O95628 RN7SL767P-201ENST00000493013 295 ntBASIC12.44□□□□□ -0.42
CNOT4O95628 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC12.44□□□□□ -0.42
CNOT4O95628 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC12.44□□□□□ -0.42
CNOT4O95628 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC12.44□□□□□ -0.42
CNOT4O95628 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC12.44□□□□□ -0.42
CNOT4O95628 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC12.44□□□□□ -0.42
CNOT4O95628 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC12.44□□□□□ -0.42
CNOT4O95628 RN7SL455P-201ENST00000580629 282 ntBASIC12.44□□□□□ -0.42
CNOT4O95628 AL021707.6-201ENST00000609212 491 ntBASIC12.44□□□□□ -0.42
CNOT4O95628 AC087392.5-201ENST00000612517 489 ntBASIC12.44□□□□□ -0.42
CNOT4O95628 AC007718.1-201ENST00000621078 280 ntBASIC12.44□□□□□ -0.42
CNOT4O95628 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CNOT4O95628 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
CNOT4O95628 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC12.44□□□□□ -0.42
CNOT4O95628 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC12.44□□□□□ -0.42
CNOT4O95628 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CNOT4O95628 RTL10-202ENST00000405640 6785 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
CNOT4O95628 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CNOT4O95628 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CNOT4O95628 GNAL-203ENST00000423027 2255 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CNOT4O95628 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC12.44□□□□□ -0.42
CNOT4O95628 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
CNOT4O95628 AC090643.2-201ENST00000623442 2029 ntBASIC12.44□□□□□ -0.42
CNOT4O95628 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC12.43□□□□□ -0.42
CNOT4O95628 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CNOT4O95628 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
CNOT4O95628 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CNOT4O95628 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CNOT4O95628 HLA-DQB1-202ENST00000399079 1501 ntBASIC12.43□□□□□ -0.42
CNOT4O95628 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CNOT4O95628 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
CNOT4O95628 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
CNOT4O95628 AC016582.3-202ENST00000443870 6580 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms