Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC12.43□□□□□ -0.42
ZIC3O60481 AC012362.1-201ENST00000434906 739 ntBASIC12.43□□□□□ -0.42
ZIC3O60481 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC12.43□□□□□ -0.42
ZIC3O60481 AL121656.1-201ENST00000440786 482 ntTSL 5 BASIC12.43□□□□□ -0.42
ZIC3O60481 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC12.43□□□□□ -0.42
ZIC3O60481 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC12.43□□□□□ -0.42
ZIC3O60481 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC12.43□□□□□ -0.42
ZIC3O60481 OR2A1-AS1-210ENST00000496968 531 ntBASIC12.43□□□□□ -0.42
ZIC3O60481 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC12.43□□□□□ -0.42
ZIC3O60481 CD44-224ENST00000526669 870 ntTSL 5 BASIC12.43□□□□□ -0.42
ZIC3O60481 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC12.43□□□□□ -0.42
ZIC3O60481 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC12.43□□□□□ -0.42
ZIC3O60481 AL118522.1-201ENST00000611368 560 ntBASIC12.43□□□□□ -0.42
ZIC3O60481 Metazoa_SRP.141-201ENST00000615072 282 ntBASIC12.43□□□□□ -0.42
ZIC3O60481 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC12.43□□□□□ -0.42
ZIC3O60481 AP001065.2-201ENST00000617205 644 ntBASIC12.43□□□□□ -0.42
ZIC3O60481 SNX1-214ENST00000625244 324 ntTSL 5 BASIC12.43□□□□□ -0.42
ZIC3O60481 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
ZIC3O60481 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
ZIC3O60481 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
ZIC3O60481 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC12.43□□□□□ -0.42
ZIC3O60481 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC12.43□□□□□ -0.42
ZIC3O60481 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
ZIC3O60481 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ZIC3O60481 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ZIC3O60481 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC12.43□□□□□ -0.42
ZIC3O60481 AC135782.3-201ENST00000562782 2105 ntBASIC12.43□□□□□ -0.42
ZIC3O60481 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ZIC3O60481 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
ZIC3O60481 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ZIC3O60481 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ZIC3O60481 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC12.43□□□□□ -0.42
ZIC3O60481 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ZIC3O60481 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ZIC3O60481 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC12.42□□□□□ -0.42
ZIC3O60481 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
ZIC3O60481 METTL6-202ENST00000383790 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ZIC3O60481 SRC-202ENST00000373558 4304 ntTSL 5 BASIC12.42□□□□□ -0.42
ZIC3O60481 ZFYVE19-215ENST00000570108 1669 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
ZIC3O60481 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
ZIC3O60481 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ZIC3O60481 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
ZIC3O60481 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC12.42□□□□□ -0.42
ZIC3O60481 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ZIC3O60481 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
ZIC3O60481 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
ZIC3O60481 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ZIC3O60481 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ZIC3O60481 BAK1P1-201ENST00000317045 636 ntBASIC12.42□□□□□ -0.42
ZIC3O60481 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
ZIC3O60481 ABCD1P4-201ENST00000399687 604 ntBASIC12.42□□□□□ -0.42
ZIC3O60481 SEPT7-AS1-201ENST00000412856 587 ntTSL 4 BASIC12.42□□□□□ -0.42
ZIC3O60481 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC12.42□□□□□ -0.42
ZIC3O60481 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC12.42□□□□□ -0.42
ZIC3O60481 GNG10P1-201ENST00000452289 199 ntBASIC12.42□□□□□ -0.42
ZIC3O60481 AC022113.2-201ENST00000504935 704 ntTSL 3 BASIC12.42□□□□□ -0.42
ZIC3O60481 AC093826.1-201ENST00000508655 993 ntBASIC12.42□□□□□ -0.42
ZIC3O60481 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC12.42□□□□□ -0.42
ZIC3O60481 CHIC2-204ENST00000512964 711 ntTSL 5 BASIC12.42□□□□□ -0.42
ZIC3O60481 IGHV3-37-201ENST00000518544 340 ntBASIC12.42□□□□□ -0.42
ZIC3O60481 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC12.42□□□□□ -0.42
ZIC3O60481 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC12.42□□□□□ -0.42
ZIC3O60481 COQ4-204ENST00000608951 781 ntTSL 2 BASIC12.42□□□□□ -0.42
ZIC3O60481 AL132780.4-201ENST00000624870 1135 ntBASIC12.42□□□□□ -0.42
ZIC3O60481 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ZIC3O60481 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
ZIC3O60481 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
ZIC3O60481 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC12.42□□□□□ -0.42
ZIC3O60481 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
ZIC3O60481 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC12.42□□□□□ -0.42
ZIC3O60481 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC12.42□□□□□ -0.42
ZIC3O60481 ERG-211ENST00000453032 1595 ntTSL 2 BASIC12.42□□□□□ -0.42
ZIC3O60481 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
ZIC3O60481 SIGLECL1-201ENST00000316401 1708 ntAPPRIS P3 TSL 2 BASIC12.42□□□□□ -0.42
ZIC3O60481 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ZIC3O60481 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC12.42□□□□□ -0.42
ZIC3O60481 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ZIC3O60481 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
ZIC3O60481 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
ZIC3O60481 AL358781.1-202ENST00000321081 1360 ntBASIC12.42□□□□□ -0.42
ZIC3O60481 SFXN4-201ENST00000355697 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ZIC3O60481 FUCA1P1-201ENST00000374476 1351 ntBASIC12.42□□□□□ -0.42
ZIC3O60481 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
ZIC3O60481 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
ZIC3O60481 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
ZIC3O60481 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC12.42□□□□□ -0.42
ZIC3O60481 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
ZIC3O60481 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
ZIC3O60481 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ZIC3O60481 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
ZIC3O60481 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ZIC3O60481 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
ZIC3O60481 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ZIC3O60481 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ZIC3O60481 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
ZIC3O60481 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC12.41□□□□□ -0.42
ZIC3O60481 RIN2-202ENST00000440354 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
ZIC3O60481 AL365181.1-201ENST00000564032 1828 ntBASIC12.41□□□□□ -0.42
ZIC3O60481 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
ZIC3O60481 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms