Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC13.95□□□□□ -0.18
SMAD6O43541 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SMAD6O43541 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SMAD6O43541 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SMAD6O43541 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC13.95□□□□□ -0.18
SMAD6O43541 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SMAD6O43541 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SMAD6O43541 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SMAD6O43541 NEK3-210ENST00000620675 2072 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
SMAD6O43541 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SMAD6O43541 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SMAD6O43541 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
SMAD6O43541 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SMAD6O43541 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
SMAD6O43541 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC13.95□□□□□ -0.18
SMAD6O43541 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
SMAD6O43541 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
SMAD6O43541 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SMAD6O43541 ETNPPL-202ENST00000411864 2028 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SMAD6O43541 SFXN4-201ENST00000355697 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SMAD6O43541 SLC7A8-214ENST00000621729 1371 ntTSL 5 BASIC13.95□□□□□ -0.18
SMAD6O43541 UBE2A-206ENST00000625938 1381 ntTSL 2 BASIC13.95□□□□□ -0.18
SMAD6O43541 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SMAD6O43541 KLKP1-203ENST00000600104 1532 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SMAD6O43541 SETMAR-205ENST00000425863 1657 ntTSL 2 BASIC13.95□□□□□ -0.18
SMAD6O43541 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SMAD6O43541 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC13.94□□□□□ -0.18
SMAD6O43541 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
SMAD6O43541 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
SMAD6O43541 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC13.94□□□□□ -0.18
SMAD6O43541 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC13.94□□□□□ -0.18
SMAD6O43541 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SMAD6O43541 CTBP2P8-201ENST00000422584 1330 ntBASIC13.94□□□□□ -0.18
SMAD6O43541 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
SMAD6O43541 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SMAD6O43541 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SMAD6O43541 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SMAD6O43541 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
SMAD6O43541 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SMAD6O43541 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC13.94□□□□□ -0.18
SMAD6O43541 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SMAD6O43541 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
SMAD6O43541 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
SMAD6O43541 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SMAD6O43541 MAL-204ENST00000354078 831 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SMAD6O43541 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SMAD6O43541 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SMAD6O43541 ABCD1P4-201ENST00000399687 604 ntBASIC13.94□□□□□ -0.18
SMAD6O43541 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC13.94□□□□□ -0.18
SMAD6O43541 BX322557.2-201ENST00000445242 379 ntTSL 3 BASIC13.94□□□□□ -0.18
SMAD6O43541 AC005077.3-201ENST00000449614 213 ntBASIC13.94□□□□□ -0.18
SMAD6O43541 FADS1-206ENST00000460649 1559 ntTSL 2 BASIC13.94□□□□□ -0.18
SMAD6O43541 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
SMAD6O43541 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC13.94□□□□□ -0.18
SMAD6O43541 KRT18P37-201ENST00000520711 1282 ntBASIC13.94□□□□□ -0.18
SMAD6O43541 AC005323.2-202ENST00000581304 493 ntTSL 3 BASIC13.94□□□□□ -0.18
SMAD6O43541 NAMA-206ENST00000605377 509 ntTSL 5 BASIC13.94□□□□□ -0.18
SMAD6O43541 LINC00431-202ENST00000636375 159 ntBASIC13.94□□□□□ -0.18
SMAD6O43541 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SMAD6O43541 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SMAD6O43541 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SMAD6O43541 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC13.94□□□□□ -0.18
SMAD6O43541 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SMAD6O43541 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC13.94□□□□□ -0.18
SMAD6O43541 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
SMAD6O43541 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
SMAD6O43541 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
SMAD6O43541 ABCD1P2-201ENST00000429313 1601 ntBASIC13.93□□□□□ -0.18
SMAD6O43541 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SMAD6O43541 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SMAD6O43541 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
SMAD6O43541 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
SMAD6O43541 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC13.93□□□□□ -0.18
SMAD6O43541 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC13.93□□□□□ -0.18
SMAD6O43541 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC13.93□□□□□ -0.18
SMAD6O43541 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SMAD6O43541 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SMAD6O43541 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
SMAD6O43541 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
SMAD6O43541 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC13.93□□□□□ -0.18
SMAD6O43541 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SMAD6O43541 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SMAD6O43541 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SMAD6O43541 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SMAD6O43541 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SMAD6O43541 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SMAD6O43541 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SMAD6O43541 AP001596.1-201ENST00000429340 781 ntTSL 5 BASIC13.93□□□□□ -0.18
SMAD6O43541 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC13.93□□□□□ -0.18
SMAD6O43541 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC13.93□□□□□ -0.18
SMAD6O43541 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC13.93□□□□□ -0.18
SMAD6O43541 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC13.93□□□□□ -0.18
SMAD6O43541 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC13.93□□□□□ -0.18
SMAD6O43541 DLK1-205ENST00000556051 469 ntTSL 2 BASIC13.93□□□□□ -0.18
SMAD6O43541 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC13.93□□□□□ -0.18
SMAD6O43541 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
SMAD6O43541 STAG3L1-204ENST00000619870 1192 ntTSL 2 BASIC13.93□□□□□ -0.18
SMAD6O43541 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC13.93□□□□□ -0.18
SMAD6O43541 ZFYVE19-215ENST00000570108 1669 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
SMAD6O43541 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms