Protein–RNA interactions for Protein: B2RPK0

HMGB1P1, Putative high mobility group protein B1-like 1, humanhuman

Predicted RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1B2RPK0 ST8SIA1-203ENST00000396037 9714 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HMGB1P1B2RPK0 ITIH5-201ENST00000397145 3132 ntTSL 2 BASIC14.11□□□□□ -0.15
HMGB1P1B2RPK0 ITSN1-208ENST00000399349 5191 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HMGB1P1B2RPK0 ZCRB1-201ENST00000266529 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HMGB1P1B2RPK0 FAM237B-201ENST00000637645 3877 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
HMGB1P1B2RPK0 CAPN8-201ENST00000366872 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HMGB1P1B2RPK0 SLC5A11-201ENST00000347898 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HMGB1P1B2RPK0 OR1I1-202ENST00000641398 5984 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
HMGB1P1B2RPK0 PI4KB-201ENST00000368872 3331 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
HMGB1P1B2RPK0 HERC6-202ENST00000273960 3473 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HMGB1P1B2RPK0 STK40-203ENST00000373130 3628 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HMGB1P1B2RPK0 PPP4R3B-206ENST00000616407 4385 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HMGB1P1B2RPK0 CACNA1G-211ENST00000503485 6768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
HMGB1P1B2RPK0 TUBB2A-201ENST00000333628 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HMGB1P1B2RPK0 EDF1-203ENST00000371649 790 ntTSL 2 BASIC14.11□□□□□ -0.15
HMGB1P1B2RPK0 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HMGB1P1B2RPK0 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HMGB1P1B2RPK0 EXOC7-207ENST00000411744 2031 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HMGB1P1B2RPK0 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC14.11□□□□□ -0.15
HMGB1P1B2RPK0 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC14.11□□□□□ -0.15
HMGB1P1B2RPK0 CD81-207ENST00000481687 890 ntTSL 2 BASIC14.11□□□□□ -0.15
HMGB1P1B2RPK0 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC14.11□□□□□ -0.15
HMGB1P1B2RPK0 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HMGB1P1B2RPK0 MAX-218ENST00000557746 571 ntTSL 4 BASIC14.11□□□□□ -0.15
HMGB1P1B2RPK0 AC025678.2-201ENST00000562061 970 ntBASIC14.11□□□□□ -0.15
HMGB1P1B2RPK0 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HMGB1P1B2RPK0 AC009486.1-201ENST00000569860 813 ntBASIC14.11□□□□□ -0.15
HMGB1P1B2RPK0 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC14.11□□□□□ -0.15
HMGB1P1B2RPK0 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC14.11□□□□□ -0.15
HMGB1P1B2RPK0 AC015967.2-201ENST00000624092 234 ntBASIC14.11□□□□□ -0.15
HMGB1P1B2RPK0 AC006435.4-201ENST00000625037 234 ntBASIC14.11□□□□□ -0.15
HMGB1P1B2RPK0 AL356737.1-201ENST00000634391 234 ntBASIC14.11□□□□□ -0.15
HMGB1P1B2RPK0 NSD2-206ENST00000382895 7827 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HMGB1P1B2RPK0 MTMR3-202ENST00000333027 8906 ntTSL 5 BASIC14.11□□□□□ -0.15
HMGB1P1B2RPK0 GRIA4-202ENST00000393125 2994 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HMGB1P1B2RPK0 GREB1-206ENST00000396123 5296 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HMGB1P1B2RPK0 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC14.11□□□□□ -0.15
HMGB1P1B2RPK0 TRPM2-201ENST00000300481 5627 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HMGB1P1B2RPK0 TMEM168-201ENST00000312814 7470 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HMGB1P1B2RPK0 PTPRN-202ENST00000409251 3622 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HMGB1P1B2RPK0 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC14.11□□□□□ -0.15
HMGB1P1B2RPK0 NLRX1-214ENST00000525863 2850 ntTSL 5 BASIC14.11□□□□□ -0.15
HMGB1P1B2RPK0 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HMGB1P1B2RPK0 ELN-204ENST00000357036 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
HMGB1P1B2RPK0 HDLBP-204ENST00000391976 4489 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
HMGB1P1B2RPK0 SPICE1-201ENST00000295872 5417 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HMGB1P1B2RPK0 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HMGB1P1B2RPK0 SLC38A7-215ENST00000570101 4549 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HMGB1P1B2RPK0 TMEM123-202ENST00000398136 3579 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
HMGB1P1B2RPK0 PHF21B-203ENST00000403565 3586 ntTSL 2 BASIC14.11□□□□□ -0.15
HMGB1P1B2RPK0 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC14.1□□□□□ -0.15
HMGB1P1B2RPK0 AL138709.1-201ENST00000614840 1693 ntBASIC14.1□□□□□ -0.15
HMGB1P1B2RPK0 AEBP1-201ENST00000223357 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HMGB1P1B2RPK0 GZF1-202ENST00000377051 4740 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HMGB1P1B2RPK0 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HMGB1P1B2RPK0 TMED7-201ENST00000456936 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HMGB1P1B2RPK0 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HMGB1P1B2RPK0 SESN2-201ENST00000253063 3453 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HMGB1P1B2RPK0 AC126564.1-201ENST00000623628 2013 ntBASIC14.1□□□□□ -0.15
HMGB1P1B2RPK0 SP140L-203ENST00000415673 2665 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
HMGB1P1B2RPK0 GRM4-209ENST00000609222 3176 ntTSL 2 BASIC14.1□□□□□ -0.15
HMGB1P1B2RPK0 CSF3R-201ENST00000331941 2375 ntTSL 5 BASIC14.1□□□□□ -0.15
HMGB1P1B2RPK0 ZNF287-201ENST00000395824 3373 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HMGB1P1B2RPK0 LINC00908-202ENST00000578613 2242 ntTSL 2 BASIC14.1□□□□□ -0.15
HMGB1P1B2RPK0 DUOX2-201ENST00000389039 6533 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
HMGB1P1B2RPK0 POM121L7P-201ENST00000329949 2404 ntBASIC14.1□□□□□ -0.15
HMGB1P1B2RPK0 DUT-208ENST00000559540 1441 ntTSL 2 BASIC14.1□□□□□ -0.15
HMGB1P1B2RPK0 CACNA1G-225ENST00000512389 6837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
HMGB1P1B2RPK0 KCNH1-205ENST00000638498 3479 ntTSL 5 BASIC14.1□□□□□ -0.15
HMGB1P1B2RPK0 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HMGB1P1B2RPK0 SH3BGRL3-202ENST00000319041 768 ntTSL 2 BASIC14.1□□□□□ -0.15
HMGB1P1B2RPK0 TPM3P8-201ENST00000330554 643 ntBASIC14.1□□□□□ -0.15
HMGB1P1B2RPK0 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
HMGB1P1B2RPK0 FAM86C1-202ENST00000359244 2110 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
HMGB1P1B2RPK0 CHCHD1-202ENST00000372837 1202 ntTSL 2 BASIC14.1□□□□□ -0.15
HMGB1P1B2RPK0 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HMGB1P1B2RPK0 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
HMGB1P1B2RPK0 OSM-203ENST00000403463 464 ntTSL 3 BASIC14.1□□□□□ -0.15
HMGB1P1B2RPK0 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC14.1□□□□□ -0.15
HMGB1P1B2RPK0 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC14.1□□□□□ -0.15
HMGB1P1B2RPK0 AC112482.1-201ENST00000492080 688 ntBASIC14.1□□□□□ -0.15
HMGB1P1B2RPK0 AC093004.1-201ENST00000508850 424 ntBASIC14.1□□□□□ -0.15
HMGB1P1B2RPK0 IGHV3-42-201ENST00000520410 361 ntBASIC14.1□□□□□ -0.15
HMGB1P1B2RPK0 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC14.1□□□□□ -0.15
HMGB1P1B2RPK0 ADIRF-AS1-203ENST00000609111 3822 ntTSL 2 BASIC14.1□□□□□ -0.15
HMGB1P1B2RPK0 SMIM11B-202ENST00000619874 843 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HMGB1P1B2RPK0 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC14.1□□□□□ -0.15
HMGB1P1B2RPK0 TTYH3-204ENST00000407643 4537 ntTSL 5 BASIC14.1□□□□□ -0.15
HMGB1P1B2RPK0 ACSF3-201ENST00000317447 3664 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
HMGB1P1B2RPK0 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HMGB1P1B2RPK0 PHF19-202ENST00000373896 4241 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
HMGB1P1B2RPK0 AP2A2-202ENST00000448903 4575 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
HMGB1P1B2RPK0 MOCS1-204ENST00000373188 3358 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HMGB1P1B2RPK0 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HMGB1P1B2RPK0 AC138028.6-201ENST00000616106 1482 ntBASIC14.1□□□□□ -0.15
HMGB1P1B2RPK0 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HMGB1P1B2RPK0 NAV1-203ENST00000367302 9685 ntTSL 5 BASIC14.1□□□□□ -0.15
HMGB1P1B2RPK0 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HMGB1P1B2RPK0 STXBP1-202ENST00000373302 3967 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HMGB1P1B2RPK0 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms