Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
NCDNQ9UBB6 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
NCDNQ9UBB6 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NCDNQ9UBB6 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
NCDNQ9UBB6 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
NCDNQ9UBB6 FGF21-202ENST00000593756 1312 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NCDNQ9UBB6 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NCDNQ9UBB6 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NCDNQ9UBB6 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC13.74□□□□□ -0.21
NCDNQ9UBB6 FXYD2-202ENST00000292079 571 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NCDNQ9UBB6 HAX1-201ENST00000328703 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NCDNQ9UBB6 ATXN3-201ENST00000340660 1205 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NCDNQ9UBB6 AC015691.1-201ENST00000394793 535 ntTSL 3 BASIC13.74□□□□□ -0.21
NCDNQ9UBB6 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NCDNQ9UBB6 AC093106.1-201ENST00000437271 352 ntBASIC13.74□□□□□ -0.21
NCDNQ9UBB6 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC13.74□□□□□ -0.21
NCDNQ9UBB6 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC13.74□□□□□ -0.21
NCDNQ9UBB6 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC13.74□□□□□ -0.21
NCDNQ9UBB6 AC022274.1-201ENST00000467082 490 ntTSL 5 BASIC13.74□□□□□ -0.21
NCDNQ9UBB6 RN7SL523P-201ENST00000484401 298 ntBASIC13.74□□□□□ -0.21
NCDNQ9UBB6 AC112250.1-201ENST00000504640 745 ntBASIC13.74□□□□□ -0.21
NCDNQ9UBB6 AC022447.5-201ENST00000504817 392 ntBASIC13.74□□□□□ -0.21
NCDNQ9UBB6 ZNF816-208ENST00000535506 529 ntTSL 4 BASIC13.74□□□□□ -0.21
NCDNQ9UBB6 SULT1A3-206ENST00000563322 906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NCDNQ9UBB6 SULT1A4-204ENST00000565290 906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NCDNQ9UBB6 INCA1-204ENST00000576820 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
NCDNQ9UBB6 RN7SL478P-201ENST00000584358 298 ntBASIC13.74□□□□□ -0.21
NCDNQ9UBB6 KF455155.1-201ENST00000604493 303 ntBASIC13.74□□□□□ -0.21
NCDNQ9UBB6 SMIM26-203ENST00000608034 670 ntAPPRIS ALT2 TSL 3 BASIC13.74□□□□□ -0.21
NCDNQ9UBB6 AP006248.1-201ENST00000610471 67 ntBASIC13.74□□□□□ -0.21
NCDNQ9UBB6 AL031673.1-201ENST00000611460 466 ntBASIC13.74□□□□□ -0.21
NCDNQ9UBB6 AC009041.4-201ENST00000620075 638 ntBASIC13.74□□□□□ -0.21
NCDNQ9UBB6 AC010531.8-201ENST00000623341 685 ntBASIC13.74□□□□□ -0.21
NCDNQ9UBB6 LINC01012-203ENST00000628762 743 ntTSL 5 BASIC13.74□□□□□ -0.21
NCDNQ9UBB6 Z82244.2-201ENST00000632196 448 ntBASIC13.74□□□□□ -0.21
NCDNQ9UBB6 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
NCDNQ9UBB6 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
NCDNQ9UBB6 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC13.74□□□□□ -0.21
NCDNQ9UBB6 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NCDNQ9UBB6 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NCDNQ9UBB6 LRRC8A-203ENST00000372600 4355 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NCDNQ9UBB6 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NCDNQ9UBB6 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NCDNQ9UBB6 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
NCDNQ9UBB6 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NCDNQ9UBB6 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
NCDNQ9UBB6 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC13.74□□□□□ -0.21
NCDNQ9UBB6 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
NCDNQ9UBB6 TP73-203ENST00000357733 4899 ntTSL 5 BASIC13.74□□□□□ -0.21
NCDNQ9UBB6 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NCDNQ9UBB6 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC13.74□□□□□ -0.21
NCDNQ9UBB6 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NCDNQ9UBB6 AL121753.2-201ENST00000624581 1461 ntBASIC13.74□□□□□ -0.21
NCDNQ9UBB6 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
NCDNQ9UBB6 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC13.74□□□□□ -0.21
NCDNQ9UBB6 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC13.73□□□□□ -0.21
NCDNQ9UBB6 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NCDNQ9UBB6 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC13.73□□□□□ -0.21
NCDNQ9UBB6 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC13.73□□□□□ -0.21
NCDNQ9UBB6 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NCDNQ9UBB6 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NCDNQ9UBB6 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NCDNQ9UBB6 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
NCDNQ9UBB6 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NCDNQ9UBB6 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NCDNQ9UBB6 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NCDNQ9UBB6 DDX19B-213ENST00000568625 1681 ntTSL 2 BASIC13.73□□□□□ -0.21
NCDNQ9UBB6 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NCDNQ9UBB6 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
NCDNQ9UBB6 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC13.73□□□□□ -0.21
NCDNQ9UBB6 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
NCDNQ9UBB6 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
NCDNQ9UBB6 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NCDNQ9UBB6 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NCDNQ9UBB6 NANOS3-201ENST00000339133 581 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NCDNQ9UBB6 TAC4-203ENST00000352793 564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
NCDNQ9UBB6 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NCDNQ9UBB6 MIR632-201ENST00000385193 94 ntBASIC13.73□□□□□ -0.21
NCDNQ9UBB6 AC011239.1-201ENST00000430988 584 ntTSL 4 BASIC13.73□□□□□ -0.21
NCDNQ9UBB6 CCND3P1-201ENST00000438347 580 ntBASIC13.73□□□□□ -0.21
NCDNQ9UBB6 CUTA-204ENST00000440279 822 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
NCDNQ9UBB6 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC13.73□□□□□ -0.21
NCDNQ9UBB6 AC015818.1-201ENST00000451011 244 ntBASIC13.73□□□□□ -0.21
NCDNQ9UBB6 RNASEH2CP1-201ENST00000454281 502 ntBASIC13.73□□□□□ -0.21
NCDNQ9UBB6 RN7SL684P-201ENST00000465665 294 ntBASIC13.73□□□□□ -0.21
NCDNQ9UBB6 C12orf57-204ENST00000540506 551 ntTSL 2 BASIC13.73□□□□□ -0.21
NCDNQ9UBB6 WNT5B-206ENST00000542408 508 ntTSL 3 BASIC13.73□□□□□ -0.21
NCDNQ9UBB6 AC002996.1-201ENST00000546840 784 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
NCDNQ9UBB6 AC010202.1-201ENST00000551181 405 ntBASIC13.73□□□□□ -0.21
NCDNQ9UBB6 AC105133.1-201ENST00000559749 742 ntTSL 3 BASIC13.73□□□□□ -0.21
NCDNQ9UBB6 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC13.73□□□□□ -0.21
NCDNQ9UBB6 AC087072.1-201ENST00000603727 421 ntBASIC13.73□□□□□ -0.21
NCDNQ9UBB6 AC112220.4-201ENST00000604982 1263 ntBASIC13.73□□□□□ -0.21
NCDNQ9UBB6 SNCAIP-206ENST00000414317 1591 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NCDNQ9UBB6 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC13.73□□□□□ -0.21
NCDNQ9UBB6 HTD2-205ENST00000477305 1531 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
NCDNQ9UBB6 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
NCDNQ9UBB6 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NCDNQ9UBB6 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NCDNQ9UBB6 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 189.6 ms