Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 SIGLEC1-201ENST00000344754 6720 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
VGLL1Q99990 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC10.63□□□□□ -0.71
VGLL1Q99990 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
VGLL1Q99990 SETD3-204ENST00000436070 2592 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
VGLL1Q99990 XRCC6-201ENST00000359308 2709 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
VGLL1Q99990 MBNL1-AS1-202ENST00000608395 6585 ntTSL 2 BASIC10.62□□□□□ -0.71
VGLL1Q99990 LANCL1-205ENST00000443314 4781 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
VGLL1Q99990 POTEE-201ENST00000356920 4159 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
VGLL1Q99990 VHL-201ENST00000256474 3737 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
VGLL1Q99990 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
VGLL1Q99990 POU2F2-216ENST00000560558 3282 ntTSL 5 BASIC10.62□□□□□ -0.71
VGLL1Q99990 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC10.62□□□□□ -0.71
VGLL1Q99990 TJAP1-205ENST00000372452 2665 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
VGLL1Q99990 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
VGLL1Q99990 LINC01165-201ENST00000445190 1623 ntBASIC10.62□□□□□ -0.71
VGLL1Q99990 SHMT1P1-201ENST00000419974 1312 ntBASIC10.62□□□□□ -0.71
VGLL1Q99990 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
VGLL1Q99990 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
VGLL1Q99990 C3orf38-201ENST00000318887 2633 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
VGLL1Q99990 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC10.62□□□□□ -0.71
VGLL1Q99990 TDRD9-202ENST00000409874 4782 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
VGLL1Q99990 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC10.62□□□□□ -0.71
VGLL1Q99990 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
VGLL1Q99990 SH2D5-201ENST00000375031 3705 ntTSL 2 BASIC10.62□□□□□ -0.71
VGLL1Q99990 RAPGEF6-207ENST00000507093 5742 ntAPPRIS ALT1 TSL 1 (best) BASIC10.62□□□□□ -0.71
VGLL1Q99990 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
VGLL1Q99990 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
VGLL1Q99990 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
VGLL1Q99990 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
VGLL1Q99990 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
VGLL1Q99990 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
VGLL1Q99990 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
VGLL1Q99990 LBX2-201ENST00000341396 886 ntTSL 3 BASIC10.62□□□□□ -0.71
VGLL1Q99990 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
VGLL1Q99990 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
VGLL1Q99990 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
VGLL1Q99990 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
VGLL1Q99990 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
VGLL1Q99990 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC10.62□□□□□ -0.71
VGLL1Q99990 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC10.62□□□□□ -0.71
VGLL1Q99990 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC10.62□□□□□ -0.71
VGLL1Q99990 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC10.62□□□□□ -0.71
VGLL1Q99990 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC10.62□□□□□ -0.71
VGLL1Q99990 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
VGLL1Q99990 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC10.62□□□□□ -0.71
VGLL1Q99990 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC10.62□□□□□ -0.71
VGLL1Q99990 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC10.62□□□□□ -0.71
VGLL1Q99990 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
VGLL1Q99990 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC10.62□□□□□ -0.71
VGLL1Q99990 PGAM1P5-201ENST00000548011 764 ntBASIC10.62□□□□□ -0.71
VGLL1Q99990 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
VGLL1Q99990 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC10.62□□□□□ -0.71
VGLL1Q99990 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC10.62□□□□□ -0.71
VGLL1Q99990 AC100827.2-201ENST00000563214 1194 ntBASIC10.62□□□□□ -0.71
VGLL1Q99990 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC10.62□□□□□ -0.71
VGLL1Q99990 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
VGLL1Q99990 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC10.62□□□□□ -0.71
VGLL1Q99990 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC10.62□□□□□ -0.71
VGLL1Q99990 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC10.62□□□□□ -0.71
VGLL1Q99990 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
VGLL1Q99990 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
VGLL1Q99990 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC10.62□□□□□ -0.71
VGLL1Q99990 AC020917.4-201ENST00000623994 1999 ntBASIC10.62□□□□□ -0.71
VGLL1Q99990 CMIP-208ENST00000566462 3512 ntTSL 4 BASIC10.62□□□□□ -0.71
VGLL1Q99990 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
VGLL1Q99990 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC10.62□□□□□ -0.71
VGLL1Q99990 STK26-204ENST00000481105 1835 ntTSL 2 BASIC10.62□□□□□ -0.71
VGLL1Q99990 GK-205ENST00000378946 3638 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
VGLL1Q99990 TMEM192-203ENST00000506087 2225 ntTSL 2 BASIC10.62□□□□□ -0.71
VGLL1Q99990 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
VGLL1Q99990 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
VGLL1Q99990 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
VGLL1Q99990 DLGAP3-201ENST00000235180 3587 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
VGLL1Q99990 OS9-203ENST00000389142 2457 ntTSL 5 BASIC10.62□□□□□ -0.71
VGLL1Q99990 CACNA1G-219ENST00000507609 6849 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
VGLL1Q99990 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
VGLL1Q99990 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC10.62□□□□□ -0.71
VGLL1Q99990 ZNF621-202ENST00000339296 6378 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
VGLL1Q99990 POLG-202ENST00000442287 4487 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
VGLL1Q99990 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
VGLL1Q99990 FMO6P-201ENST00000236166 1620 ntBASIC10.62□□□□□ -0.71
VGLL1Q99990 SLC4A2-201ENST00000392826 3947 ntAPPRIS ALT2 TSL 2 BASIC10.62□□□□□ -0.71
VGLL1Q99990 MYRIP-203ENST00000425621 2981 ntTSL 2 BASIC10.62□□□□□ -0.71
VGLL1Q99990 AC073862.5-201ENST00000624129 2027 ntBASIC10.62□□□□□ -0.71
VGLL1Q99990 OPLAH-204ENST00000618853 4031 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
VGLL1Q99990 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
VGLL1Q99990 MYO9B-206ENST00000595618 7623 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
VGLL1Q99990 SLC35A4-203ENST00000612662 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
VGLL1Q99990 KCNMA1-285ENST00000640605 3864 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
VGLL1Q99990 AC141928.1-201ENST00000511928 4525 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
VGLL1Q99990 PCDHB19P-202ENST00000625133 2914 ntBASIC10.61□□□□□ -0.71
VGLL1Q99990 ITSN1-208ENST00000399349 5191 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
VGLL1Q99990 MAT2B-204ENST00000518095 3409 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
VGLL1Q99990 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC10.61□□□□□ -0.71
VGLL1Q99990 CACNA1F-201ENST00000323022 6037 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
VGLL1Q99990 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
VGLL1Q99990 DAB1-207ENST00000420954 1817 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
VGLL1Q99990 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC10.61□□□□□ -0.71
VGLL1Q99990 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC10.61□□□□□ -0.71
VGLL1Q99990 MRVI1-202ENST00000424001 5815 ntTSL 5 BASIC10.61□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms