Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 GGTLC4P-201ENST00000402176 664 ntBASIC15.71■□□□□ 0.11
SYNGAP1Q96PV0 AF274858.1-201ENST00000406288 372 ntBASIC15.71■□□□□ 0.11
SYNGAP1Q96PV0 NME6-208ENST00000435684 599 ntTSL 2 BASIC15.71■□□□□ 0.11
SYNGAP1Q96PV0 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC15.71■□□□□ 0.11
SYNGAP1Q96PV0 NALT1-202ENST00000450304 437 ntTSL 3 BASIC15.71■□□□□ 0.11
SYNGAP1Q96PV0 CALCA-205ENST00000486207 851 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
SYNGAP1Q96PV0 RPAIN-205ENST00000536255 1057 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SYNGAP1Q96PV0 AC009065.6-201ENST00000568795 456 ntTSL 2 BASIC15.71■□□□□ 0.11
SYNGAP1Q96PV0 FAAP24-203ENST00000589646 836 ntTSL 3 BASIC15.71■□□□□ 0.11
SYNGAP1Q96PV0 ESR1-214ENST00000638569 132 ntTSL 5 BASIC15.71■□□□□ 0.11
SYNGAP1Q96PV0 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC15.71■□□□□ 0.11
SYNGAP1Q96PV0 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
SYNGAP1Q96PV0 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
SYNGAP1Q96PV0 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
SYNGAP1Q96PV0 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SYNGAP1Q96PV0 TCAM1P-207ENST00000485295 1537 ntBASIC15.71■□□□□ 0.11
SYNGAP1Q96PV0 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC15.71■□□□□ 0.11
SYNGAP1Q96PV0 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
SYNGAP1Q96PV0 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC15.71■□□□□ 0.11
SYNGAP1Q96PV0 AC090643.2-201ENST00000623442 2029 ntBASIC15.71■□□□□ 0.11
SYNGAP1Q96PV0 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
SYNGAP1Q96PV0 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SYNGAP1Q96PV0 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
SYNGAP1Q96PV0 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
SYNGAP1Q96PV0 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC15.71■□□□□ 0.11
SYNGAP1Q96PV0 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
SYNGAP1Q96PV0 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC15.71■□□□□ 0.11
SYNGAP1Q96PV0 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
SYNGAP1Q96PV0 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC15.71■□□□□ 0.1
SYNGAP1Q96PV0 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.1
SYNGAP1Q96PV0 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
SYNGAP1Q96PV0 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
SYNGAP1Q96PV0 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
SYNGAP1Q96PV0 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC15.71■□□□□ 0.1
SYNGAP1Q96PV0 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SYNGAP1Q96PV0 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SYNGAP1Q96PV0 PRL-201ENST00000306482 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SYNGAP1Q96PV0 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SYNGAP1Q96PV0 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SYNGAP1Q96PV0 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SYNGAP1Q96PV0 IFNLR1-203ENST00000374418 674 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SYNGAP1Q96PV0 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SYNGAP1Q96PV0 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SYNGAP1Q96PV0 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SYNGAP1Q96PV0 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
SYNGAP1Q96PV0 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SYNGAP1Q96PV0 MED7-202ENST00000420343 1382 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
SYNGAP1Q96PV0 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC15.7■□□□□ 0.1
SYNGAP1Q96PV0 ARSEP1-202ENST00000430152 499 ntTSL 3 BASIC15.7■□□□□ 0.1
SYNGAP1Q96PV0 AC093609.1-201ENST00000434020 952 ntTSL 2 BASIC15.7■□□□□ 0.1
SYNGAP1Q96PV0 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC15.7■□□□□ 0.1
SYNGAP1Q96PV0 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC15.7■□□□□ 0.1
SYNGAP1Q96PV0 RN7SL351P-201ENST00000469306 248 ntBASIC15.7■□□□□ 0.1
SYNGAP1Q96PV0 RNF216P1-212ENST00000493407 659 ntTSL 3 BASIC15.7■□□□□ 0.1
SYNGAP1Q96PV0 ALG1L7P-201ENST00000502317 768 ntBASIC15.7■□□□□ 0.1
SYNGAP1Q96PV0 PAX5-210ENST00000520281 969 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SYNGAP1Q96PV0 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC15.7■□□□□ 0.1
SYNGAP1Q96PV0 AC073569.2-201ENST00000551995 354 ntTSL 5 BASIC15.7■□□□□ 0.1
SYNGAP1Q96PV0 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
SYNGAP1Q96PV0 MBP-238ENST00000580402 915 ntTSL 5 BASIC15.7■□□□□ 0.1
SYNGAP1Q96PV0 MIR4326-201ENST00000582203 59 ntBASIC15.7■□□□□ 0.1
SYNGAP1Q96PV0 ZNF737-204ENST00000596797 569 ntTSL 4 BASIC15.7■□□□□ 0.1
SYNGAP1Q96PV0 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC15.7■□□□□ 0.1
SYNGAP1Q96PV0 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
SYNGAP1Q96PV0 C7orf49-214ENST00000620897 1349 ntTSL 3 BASIC15.7■□□□□ 0.1
SYNGAP1Q96PV0 AC126755.5-201ENST00000622756 267 ntBASIC15.7■□□□□ 0.1
SYNGAP1Q96PV0 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SYNGAP1Q96PV0 RARS-210ENST00000626454 177 ntTSL 5 BASIC15.7■□□□□ 0.1
SYNGAP1Q96PV0 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SYNGAP1Q96PV0 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SYNGAP1Q96PV0 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
SYNGAP1Q96PV0 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SYNGAP1Q96PV0 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SYNGAP1Q96PV0 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC15.7■□□□□ 0.1
SYNGAP1Q96PV0 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
SYNGAP1Q96PV0 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SYNGAP1Q96PV0 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SYNGAP1Q96PV0 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SYNGAP1Q96PV0 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SYNGAP1Q96PV0 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC15.7■□□□□ 0.1
SYNGAP1Q96PV0 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SYNGAP1Q96PV0 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
SYNGAP1Q96PV0 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SYNGAP1Q96PV0 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SYNGAP1Q96PV0 FADS1-206ENST00000460649 1559 ntTSL 2 BASIC15.7■□□□□ 0.1
SYNGAP1Q96PV0 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SYNGAP1Q96PV0 LINC02486-201ENST00000604157 3000 ntBASIC15.7■□□□□ 0.1
SYNGAP1Q96PV0 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC15.7■□□□□ 0.1
SYNGAP1Q96PV0 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
SYNGAP1Q96PV0 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SYNGAP1Q96PV0 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SYNGAP1Q96PV0 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
SYNGAP1Q96PV0 SFXN4-201ENST00000355697 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SYNGAP1Q96PV0 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SYNGAP1Q96PV0 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SYNGAP1Q96PV0 HIST1H4B-201ENST00000377745 438 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
SYNGAP1Q96PV0 JPT2-203ENST00000382711 894 ntTSL 4 BASIC15.69■□□□□ 0.1
SYNGAP1Q96PV0 RPL10-203ENST00000406022 748 ntTSL 3 BASIC15.69■□□□□ 0.1
SYNGAP1Q96PV0 LINC01656-201ENST00000415702 630 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SYNGAP1Q96PV0 AL080243.1-201ENST00000423293 1060 ntBASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms