Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 SMCO4-202ENST00000525141 889 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
CDC42BPAQ5VT25 AP005264.6-203ENST00000586882 1050 ntTSL 5 BASIC20.12■□□□□ 0.81
CDC42BPAQ5VT25 AC136475.9-201ENST00000605240 497 ntBASIC20.12■□□□□ 0.81
CDC42BPAQ5VT25 IFI27-214ENST00000620396 599 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
CDC42BPAQ5VT25 SARS2-205ENST00000594171 1631 ntTSL 2 BASIC20.12■□□□□ 0.81
CDC42BPAQ5VT25 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC20.12■□□□□ 0.81
CDC42BPAQ5VT25 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.12■□□□□ 0.81
CDC42BPAQ5VT25 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDC42BPAQ5VT25 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC20.12■□□□□ 0.81
CDC42BPAQ5VT25 ZP4-201ENST00000366570 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDC42BPAQ5VT25 IKZF3-211ENST00000394189 1552 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CDC42BPAQ5VT25 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDC42BPAQ5VT25 OPRM1-210ENST00000452687 1352 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CDC42BPAQ5VT25 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CDC42BPAQ5VT25 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CDC42BPAQ5VT25 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
CDC42BPAQ5VT25 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
CDC42BPAQ5VT25 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
CDC42BPAQ5VT25 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC20.11■□□□□ 0.81
CDC42BPAQ5VT25 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDC42BPAQ5VT25 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDC42BPAQ5VT25 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CDC42BPAQ5VT25 NDUFB11-201ENST00000276062 948 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CDC42BPAQ5VT25 AL121972.2-201ENST00000431108 556 ntTSL 4 BASIC20.11■□□□□ 0.81
CDC42BPAQ5VT25 AC010997.1-201ENST00000447646 350 ntBASIC20.11■□□□□ 0.81
CDC42BPAQ5VT25 SVILP1-203ENST00000450581 486 ntTSL 3 BASIC20.11■□□□□ 0.81
CDC42BPAQ5VT25 RNF7-205ENST00000480908 782 ntTSL 4 BASIC20.11■□□□□ 0.81
CDC42BPAQ5VT25 VAMP2-203ENST00000481878 557 ntAPPRIS ALT1 TSL 2 BASIC20.11■□□□□ 0.81
CDC42BPAQ5VT25 AC105424.1-201ENST00000514583 209 ntBASIC20.11■□□□□ 0.81
CDC42BPAQ5VT25 TNNI2-206ENST00000617947 699 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
CDC42BPAQ5VT25 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CDC42BPAQ5VT25 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDC42BPAQ5VT25 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CDC42BPAQ5VT25 USP8-219ENST00000625664 1568 ntTSL 5 BASIC20.11■□□□□ 0.81
CDC42BPAQ5VT25 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDC42BPAQ5VT25 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDC42BPAQ5VT25 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC20.11■□□□□ 0.81
CDC42BPAQ5VT25 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDC42BPAQ5VT25 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CDC42BPAQ5VT25 SRPRA-201ENST00000332118 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDC42BPAQ5VT25 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDC42BPAQ5VT25 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
CDC42BPAQ5VT25 AC023908.3-201ENST00000564211 3047 ntBASIC20.11■□□□□ 0.81
CDC42BPAQ5VT25 GDA-203ENST00000376986 1771 ntTSL 2 BASIC20.11■□□□□ 0.81
CDC42BPAQ5VT25 TTC26-207ENST00000478836 1794 ntTSL 2 BASIC20.11■□□□□ 0.81
CDC42BPAQ5VT25 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDC42BPAQ5VT25 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDC42BPAQ5VT25 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC20.11■□□□□ 0.81
CDC42BPAQ5VT25 MYL7-201ENST00000223364 612 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDC42BPAQ5VT25 KIR2DL4-204ENST00000359085 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDC42BPAQ5VT25 PHACTR1-203ENST00000379335 943 ntTSL 2 BASIC20.1■□□□□ 0.81
CDC42BPAQ5VT25 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC20.1■□□□□ 0.81
CDC42BPAQ5VT25 AC105935.1-203ENST00000419183 600 ntTSL 3 BASIC20.1■□□□□ 0.81
CDC42BPAQ5VT25 SMCR2-201ENST00000456090 564 ntTSL 2 BASIC20.1■□□□□ 0.81
CDC42BPAQ5VT25 TMEM154-202ENST00000504064 878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDC42BPAQ5VT25 AC073610.2-201ENST00000537495 406 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
CDC42BPAQ5VT25 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CDC42BPAQ5VT25 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDC42BPAQ5VT25 USP28-214ENST00000545540 3431 ntTSL 2 BASIC20.1■□□□□ 0.81
CDC42BPAQ5VT25 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CDC42BPAQ5VT25 DAXX-203ENST00000414083 2355 ntTSL 2 BASIC20.1■□□□□ 0.81
CDC42BPAQ5VT25 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC20.1■□□□□ 0.81
CDC42BPAQ5VT25 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDC42BPAQ5VT25 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDC42BPAQ5VT25 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDC42BPAQ5VT25 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDC42BPAQ5VT25 MAGEB1-201ENST00000378981 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDC42BPAQ5VT25 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDC42BPAQ5VT25 DNPEP-205ENST00000373972 1578 ntTSL 2 BASIC20.1■□□□□ 0.81
CDC42BPAQ5VT25 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
CDC42BPAQ5VT25 RNASE8-201ENST00000308227 634 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
CDC42BPAQ5VT25 IGHV3-66-201ENST00000390632 427 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
CDC42BPAQ5VT25 AC074019.1-201ENST00000428788 1096 ntBASIC20.1■□□□□ 0.81
CDC42BPAQ5VT25 AC116347.1-201ENST00000442824 720 ntBASIC20.1■□□□□ 0.81
CDC42BPAQ5VT25 HNRNPA1P73-201ENST00000446472 928 ntBASIC20.1■□□□□ 0.81
CDC42BPAQ5VT25 RPS15P5-201ENST00000449885 432 ntBASIC20.1■□□□□ 0.81
CDC42BPAQ5VT25 AC012100.1-201ENST00000470304 282 ntBASIC20.1■□□□□ 0.81
CDC42BPAQ5VT25 HINT1-204ENST00000506908 681 ntTSL 2 BASIC20.1■□□□□ 0.81
CDC42BPAQ5VT25 ZNF268-208ENST00000539248 759 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CDC42BPAQ5VT25 ZNF268-212ENST00000542711 861 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CDC42BPAQ5VT25 RPSAP67-201ENST00000584105 862 ntBASIC20.1■□□□□ 0.81
CDC42BPAQ5VT25 GPHB5-202ENST00000621500 543 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
CDC42BPAQ5VT25 AC021072.1-201ENST00000635789 835 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
CDC42BPAQ5VT25 AC245369.8-201ENST00000636589 306 ntBASIC20.1■□□□□ 0.81
CDC42BPAQ5VT25 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC20.1■□□□□ 0.81
CDC42BPAQ5VT25 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CDC42BPAQ5VT25 DHX16-201ENST00000376437 1933 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CDC42BPAQ5VT25 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC20.1■□□□□ 0.81
CDC42BPAQ5VT25 TARS2-205ENST00000438568 2188 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CDC42BPAQ5VT25 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDC42BPAQ5VT25 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDC42BPAQ5VT25 AC012158.1-201ENST00000535684 1366 ntTSL 2 BASIC20.1■□□□□ 0.81
CDC42BPAQ5VT25 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDC42BPAQ5VT25 CDC42-202ENST00000344548 2256 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDC42BPAQ5VT25 KRTAP10-4-201ENST00000400374 1643 ntAPPRIS P2 BASIC20.09■□□□□ 0.81
CDC42BPAQ5VT25 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC20.09■□□□□ 0.81
CDC42BPAQ5VT25 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDC42BPAQ5VT25 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CDC42BPAQ5VT25 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDC42BPAQ5VT25 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms