Protein–RNA interactions for Protein: Q00975

CACNA1B, Voltage-dependent N-type calcium channel subunit alpha-1B, humanhuman

Predictions only

Length 2,339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1BQ00975 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CACNA1BQ00975 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
CACNA1BQ00975 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CACNA1BQ00975 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CACNA1BQ00975 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC12.67□□□□□ -0.38
CACNA1BQ00975 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC12.67□□□□□ -0.38
CACNA1BQ00975 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC12.66□□□□□ -0.38
CACNA1BQ00975 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CACNA1BQ00975 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CACNA1BQ00975 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
CACNA1BQ00975 DNAJB6-204ENST00000429029 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CACNA1BQ00975 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CACNA1BQ00975 OR52L1-201ENST00000332249 1094 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
CACNA1BQ00975 KRTAP13-1-201ENST00000355459 749 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
CACNA1BQ00975 UGT1A6-202ENST00000373424 1128 ntTSL 2 BASIC12.66□□□□□ -0.38
CACNA1BQ00975 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
CACNA1BQ00975 CORO1C-203ENST00000421578 1296 ntTSL 2 BASIC12.66□□□□□ -0.38
CACNA1BQ00975 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC12.66□□□□□ -0.38
CACNA1BQ00975 AL137028.2-201ENST00000614601 256 ntBASIC12.66□□□□□ -0.38
CACNA1BQ00975 MECP2-213ENST00000622433 1071 ntTSL 5 BASIC12.66□□□□□ -0.38
CACNA1BQ00975 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CACNA1BQ00975 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
CACNA1BQ00975 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CACNA1BQ00975 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CACNA1BQ00975 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CACNA1BQ00975 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CACNA1BQ00975 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
CACNA1BQ00975 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CACNA1BQ00975 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CACNA1BQ00975 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
CACNA1BQ00975 AC007686.3-201ENST00000619017 3487 ntBASIC12.66□□□□□ -0.38
CACNA1BQ00975 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
CACNA1BQ00975 PGR-210ENST00000619228 3038 ntTSL 5 BASIC12.66□□□□□ -0.38
CACNA1BQ00975 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
CACNA1BQ00975 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CACNA1BQ00975 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC12.66□□□□□ -0.38
CACNA1BQ00975 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CACNA1BQ00975 PRMT5-202ENST00000324366 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CACNA1BQ00975 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CACNA1BQ00975 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CACNA1BQ00975 HSPB11-204ENST00000371378 894 ntTSL 3 BASIC12.66□□□□□ -0.38
CACNA1BQ00975 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC12.66□□□□□ -0.38
CACNA1BQ00975 MTND6P11-201ENST00000431890 483 ntBASIC12.66□□□□□ -0.38
CACNA1BQ00975 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC12.66□□□□□ -0.38
CACNA1BQ00975 NDUFB1-202ENST00000553514 454 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
CACNA1BQ00975 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
CACNA1BQ00975 AC005336.1-201ENST00000585431 1243 ntBASIC12.66□□□□□ -0.38
CACNA1BQ00975 HIST1H4K-201ENST00000611927 312 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
CACNA1BQ00975 HIST1H3E-201ENST00000614911 462 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
CACNA1BQ00975 UPF3B-204ENST00000619445 1385 ntTSL 5 BASIC12.66□□□□□ -0.38
CACNA1BQ00975 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CACNA1BQ00975 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC12.66□□□□□ -0.38
CACNA1BQ00975 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC12.66□□□□□ -0.38
CACNA1BQ00975 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC12.66□□□□□ -0.38
CACNA1BQ00975 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
CACNA1BQ00975 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC12.66□□□□□ -0.38
CACNA1BQ00975 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CACNA1BQ00975 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
CACNA1BQ00975 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC12.65□□□□□ -0.38
CACNA1BQ00975 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
CACNA1BQ00975 DOC2GP-204ENST00000639052 2548 ntBASIC12.65□□□□□ -0.38
CACNA1BQ00975 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CACNA1BQ00975 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC12.65□□□□□ -0.38
CACNA1BQ00975 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
CACNA1BQ00975 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CACNA1BQ00975 HMBS-202ENST00000392841 1411 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CACNA1BQ00975 AC015656.1-201ENST00000624209 3578 ntBASIC12.65□□□□□ -0.38
CACNA1BQ00975 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
CACNA1BQ00975 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CACNA1BQ00975 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CACNA1BQ00975 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CACNA1BQ00975 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CACNA1BQ00975 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC12.65□□□□□ -0.38
CACNA1BQ00975 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CACNA1BQ00975 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC12.65□□□□□ -0.38
CACNA1BQ00975 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CACNA1BQ00975 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CACNA1BQ00975 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CACNA1BQ00975 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CACNA1BQ00975 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CACNA1BQ00975 YAE1D1-201ENST00000223273 899 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CACNA1BQ00975 OR4C6-201ENST00000314259 1020 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
CACNA1BQ00975 BCL2L11-203ENST00000357757 947 ntTSL 5 BASIC12.65□□□□□ -0.38
CACNA1BQ00975 LAMTOR2-203ENST00000368305 655 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CACNA1BQ00975 PLA2G1B-202ENST00000423423 423 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CACNA1BQ00975 WSB1-203ENST00000427287 1149 ntTSL 2 BASIC12.65□□□□□ -0.38
CACNA1BQ00975 HTATIP2-203ENST00000443524 967 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
CACNA1BQ00975 AC103925.1-201ENST00000453155 771 ntTSL 3 BASIC12.65□□□□□ -0.38
CACNA1BQ00975 AC021678.2-201ENST00000521731 887 ntTSL 2 BASIC12.65□□□□□ -0.38
CACNA1BQ00975 C9orf135-205ENST00000527647 748 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CACNA1BQ00975 CSRP1-219ENST00000533432 1149 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
CACNA1BQ00975 RN7SL750P-201ENST00000582814 238 ntBASIC12.65□□□□□ -0.38
CACNA1BQ00975 WSB1-213ENST00000583193 552 ntTSL 4 BASIC12.65□□□□□ -0.38
CACNA1BQ00975 AC100788.1-201ENST00000591108 945 ntTSL 5 BASIC12.65□□□□□ -0.38
CACNA1BQ00975 AC022150.2-201ENST00000596451 644 ntTSL 3 BASIC12.65□□□□□ -0.38
CACNA1BQ00975 PROX1-AS1-205ENST00000598091 720 ntTSL 5 BASIC12.65□□□□□ -0.38
CACNA1BQ00975 AL136115.2-201ENST00000602889 587 ntTSL 5 BASIC12.65□□□□□ -0.38
CACNA1BQ00975 AC137723.2-201ENST00000623540 398 ntBASIC12.65□□□□□ -0.38
CACNA1BQ00975 CD74-201ENST00000009530 981 ntAPPRIS P2 TSL 2 BASIC12.65□□□□□ -0.38
CACNA1BQ00975 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms