Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 COQ4-204ENST00000608951 781 ntTSL 2 BASIC16.26■□□□□ 0.19
IRX3P78415 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC16.26■□□□□ 0.19
IRX3P78415 AC004554.1-201ENST00000422830 1468 ntBASIC16.26■□□□□ 0.19
IRX3P78415 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
IRX3P78415 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC16.26■□□□□ 0.19
IRX3P78415 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC16.26■□□□□ 0.19
IRX3P78415 SELPLG-203ENST00000550948 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
IRX3P78415 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
IRX3P78415 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
IRX3P78415 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC16.26■□□□□ 0.19
IRX3P78415 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
IRX3P78415 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC16.26■□□□□ 0.19
IRX3P78415 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
IRX3P78415 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
IRX3P78415 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC16.26■□□□□ 0.19
IRX3P78415 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC16.26■□□□□ 0.19
IRX3P78415 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC16.26■□□□□ 0.19
IRX3P78415 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
IRX3P78415 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
IRX3P78415 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
IRX3P78415 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC16.26■□□□□ 0.19
IRX3P78415 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
IRX3P78415 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
IRX3P78415 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
IRX3P78415 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC16.25■□□□□ 0.19
IRX3P78415 AC092117.1-201ENST00000621230 3250 ntBASIC16.25■□□□□ 0.19
IRX3P78415 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
IRX3P78415 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
IRX3P78415 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
IRX3P78415 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
IRX3P78415 AL590824.1-201ENST00000403828 1349 ntBASIC16.25■□□□□ 0.19
IRX3P78415 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
IRX3P78415 OS9-204ENST00000389146 2091 ntTSL 2 BASIC16.25■□□□□ 0.19
IRX3P78415 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
IRX3P78415 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC16.25■□□□□ 0.19
IRX3P78415 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
IRX3P78415 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
IRX3P78415 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
IRX3P78415 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
IRX3P78415 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
IRX3P78415 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC16.25■□□□□ 0.19
IRX3P78415 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
IRX3P78415 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC16.25■□□□□ 0.19
IRX3P78415 SERF2-206ENST00000409291 807 ntTSL 3 BASIC16.25■□□□□ 0.19
IRX3P78415 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
IRX3P78415 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC16.25■□□□□ 0.19
IRX3P78415 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC16.25■□□□□ 0.19
IRX3P78415 KRT18P37-201ENST00000520711 1282 ntBASIC16.25■□□□□ 0.19
IRX3P78415 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC16.25■□□□□ 0.19
IRX3P78415 CYP4F36P-201ENST00000589193 186 ntBASIC16.25■□□□□ 0.19
IRX3P78415 AL160191.2-201ENST00000603975 601 ntBASIC16.25■□□□□ 0.19
IRX3P78415 FANCC-210ENST00000490972 2709 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
IRX3P78415 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
IRX3P78415 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
IRX3P78415 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
IRX3P78415 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
IRX3P78415 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
IRX3P78415 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
IRX3P78415 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
IRX3P78415 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
IRX3P78415 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
IRX3P78415 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
IRX3P78415 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
IRX3P78415 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
IRX3P78415 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC16.25■□□□□ 0.19
IRX3P78415 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC16.25■□□□□ 0.19
IRX3P78415 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
IRX3P78415 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
IRX3P78415 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
IRX3P78415 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC16.25■□□□□ 0.19
IRX3P78415 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
IRX3P78415 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC16.24■□□□□ 0.19
IRX3P78415 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
IRX3P78415 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
IRX3P78415 NOX5-202ENST00000388866 2804 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
IRX3P78415 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
IRX3P78415 SHMT1P1-201ENST00000419974 1312 ntBASIC16.24■□□□□ 0.19
IRX3P78415 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
IRX3P78415 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC16.24■□□□□ 0.19
IRX3P78415 DPP10-201ENST00000310323 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
IRX3P78415 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
IRX3P78415 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
IRX3P78415 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
IRX3P78415 KIF21B-204ENST00000461742 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
IRX3P78415 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
IRX3P78415 MIR566-201ENST00000385187 94 ntBASIC16.24■□□□□ 0.19
IRX3P78415 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
IRX3P78415 KRT18P4-201ENST00000422599 1288 ntBASIC16.24■□□□□ 0.19
IRX3P78415 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
IRX3P78415 ASS1P2-201ENST00000439895 1223 ntBASIC16.24■□□□□ 0.19
IRX3P78415 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC16.24■□□□□ 0.19
IRX3P78415 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC16.24■□□□□ 0.19
IRX3P78415 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC16.24■□□□□ 0.19
IRX3P78415 CES1P2-201ENST00000566467 1242 ntBASIC16.24■□□□□ 0.19
IRX3P78415 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
IRX3P78415 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
IRX3P78415 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
IRX3P78415 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
IRX3P78415 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
IRX3P78415 AMT-221ENST00000538581 2038 ntTSL 2 BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms