Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC12.15□□□□□ -0.46
HIST1H3AP68431 DUTP3-201ENST00000450025 415 ntBASIC12.15□□□□□ -0.46
HIST1H3AP68431 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC12.15□□□□□ -0.46
HIST1H3AP68431 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC12.15□□□□□ -0.46
HIST1H3AP68431 AC024681.1-201ENST00000521917 487 ntBASIC12.15□□□□□ -0.46
HIST1H3AP68431 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC12.15□□□□□ -0.46
HIST1H3AP68431 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
HIST1H3AP68431 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC12.15□□□□□ -0.46
HIST1H3AP68431 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
HIST1H3AP68431 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC12.15□□□□□ -0.46
HIST1H3AP68431 MIR4326-201ENST00000582203 59 ntBASIC12.15□□□□□ -0.46
HIST1H3AP68431 NAT9-220ENST00000582870 896 ntTSL 5 BASIC12.15□□□□□ -0.46
HIST1H3AP68431 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC12.15□□□□□ -0.46
HIST1H3AP68431 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
HIST1H3AP68431 AC009560.1-201ENST00000620208 434 ntBASIC12.15□□□□□ -0.46
HIST1H3AP68431 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
HIST1H3AP68431 TRPA1-201ENST00000262209 5223 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
HIST1H3AP68431 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
HIST1H3AP68431 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
HIST1H3AP68431 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
HIST1H3AP68431 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
HIST1H3AP68431 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
HIST1H3AP68431 FCHO1-221ENST00000597512 2934 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
HIST1H3AP68431 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
HIST1H3AP68431 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC12.15□□□□□ -0.46
HIST1H3AP68431 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
HIST1H3AP68431 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
HIST1H3AP68431 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
HIST1H3AP68431 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
HIST1H3AP68431 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
HIST1H3AP68431 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC12.15□□□□□ -0.46
HIST1H3AP68431 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
HIST1H3AP68431 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
HIST1H3AP68431 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
HIST1H3AP68431 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
HIST1H3AP68431 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC12.15□□□□□ -0.47
HIST1H3AP68431 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.47
HIST1H3AP68431 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC12.15□□□□□ -0.47
HIST1H3AP68431 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
HIST1H3AP68431 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
HIST1H3AP68431 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.47
HIST1H3AP68431 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC12.15□□□□□ -0.47
HIST1H3AP68431 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
HIST1H3AP68431 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
HIST1H3AP68431 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
HIST1H3AP68431 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
HIST1H3AP68431 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
HIST1H3AP68431 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
HIST1H3AP68431 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC12.14□□□□□ -0.47
HIST1H3AP68431 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
HIST1H3AP68431 SNRNP27-201ENST00000244227 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
HIST1H3AP68431 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC12.14□□□□□ -0.47
HIST1H3AP68431 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
HIST1H3AP68431 AC005014.1-201ENST00000432006 2976 ntBASIC12.14□□□□□ -0.47
HIST1H3AP68431 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
HIST1H3AP68431 AC040160.2-201ENST00000623816 1675 ntBASIC12.14□□□□□ -0.47
HIST1H3AP68431 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
HIST1H3AP68431 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
HIST1H3AP68431 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
HIST1H3AP68431 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
HIST1H3AP68431 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
HIST1H3AP68431 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
HIST1H3AP68431 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC12.14□□□□□ -0.47
HIST1H3AP68431 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
HIST1H3AP68431 MIR557-201ENST00000385239 98 ntBASIC12.14□□□□□ -0.47
HIST1H3AP68431 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
HIST1H3AP68431 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
HIST1H3AP68431 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
HIST1H3AP68431 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
HIST1H3AP68431 PTPA-217ENST00000434095 870 ntTSL 2 BASIC12.14□□□□□ -0.47
HIST1H3AP68431 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC12.14□□□□□ -0.47
HIST1H3AP68431 AL353637.1-201ENST00000451571 732 ntBASIC12.14□□□□□ -0.47
HIST1H3AP68431 AC008723.1-201ENST00000506922 207 ntBASIC12.14□□□□□ -0.47
HIST1H3AP68431 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC12.14□□□□□ -0.47
HIST1H3AP68431 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC12.14□□□□□ -0.47
HIST1H3AP68431 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
HIST1H3AP68431 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
HIST1H3AP68431 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC12.14□□□□□ -0.47
HIST1H3AP68431 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC12.14□□□□□ -0.47
HIST1H3AP68431 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
HIST1H3AP68431 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
HIST1H3AP68431 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
HIST1H3AP68431 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
HIST1H3AP68431 FAM86C1-202ENST00000359244 2110 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
HIST1H3AP68431 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC12.14□□□□□ -0.47
HIST1H3AP68431 HAL-202ENST00000538703 2637 ntTSL 2 BASIC12.14□□□□□ -0.47
HIST1H3AP68431 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC12.14□□□□□ -0.47
HIST1H3AP68431 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
HIST1H3AP68431 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC12.14□□□□□ -0.47
HIST1H3AP68431 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
HIST1H3AP68431 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
HIST1H3AP68431 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC12.14□□□□□ -0.47
HIST1H3AP68431 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
HIST1H3AP68431 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
HIST1H3AP68431 TMEM192-203ENST00000506087 2225 ntTSL 2 BASIC12.14□□□□□ -0.47
HIST1H3AP68431 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
HIST1H3AP68431 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC12.14□□□□□ -0.47
HIST1H3AP68431 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
HIST1H3AP68431 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
HIST1H3AP68431 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms