Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 KLKP1-203ENST00000600104 1532 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
AP1S2P56377 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
AP1S2P56377 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
AP1S2P56377 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
AP1S2P56377 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
AP1S2P56377 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC13.55□□□□□ -0.24
AP1S2P56377 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
AP1S2P56377 NME1-209ENST00000511355 1645 ntTSL 5 BASIC13.55□□□□□ -0.24
AP1S2P56377 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC13.55□□□□□ -0.24
AP1S2P56377 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
AP1S2P56377 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
AP1S2P56377 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
AP1S2P56377 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC13.55□□□□□ -0.24
AP1S2P56377 AP000358.1-201ENST00000456260 156 ntBASIC13.55□□□□□ -0.24
AP1S2P56377 HOXB-AS3-209ENST00000477144 743 ntTSL 5 BASIC13.55□□□□□ -0.24
AP1S2P56377 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
AP1S2P56377 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC13.55□□□□□ -0.24
AP1S2P56377 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC13.55□□□□□ -0.24
AP1S2P56377 SIGLEC22P-201ENST00000599104 714 ntBASIC13.55□□□□□ -0.24
AP1S2P56377 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC13.55□□□□□ -0.24
AP1S2P56377 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
AP1S2P56377 MIR6787-201ENST00000616675 61 ntBASIC13.55□□□□□ -0.24
AP1S2P56377 GARS-210ENST00000627489 324 ntTSL 4 BASIC13.55□□□□□ -0.24
AP1S2P56377 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC13.55□□□□□ -0.24
AP1S2P56377 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
AP1S2P56377 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
AP1S2P56377 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
AP1S2P56377 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
AP1S2P56377 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
AP1S2P56377 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
AP1S2P56377 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
AP1S2P56377 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
AP1S2P56377 SON-203ENST00000381679 7860 ntTSL 5 BASIC13.55□□□□□ -0.24
AP1S2P56377 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
AP1S2P56377 AC004623.1-201ENST00000624592 2127 ntBASIC13.55□□□□□ -0.24
AP1S2P56377 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
AP1S2P56377 LINC00638-201ENST00000555578 2518 ntBASIC13.55□□□□□ -0.24
AP1S2P56377 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
AP1S2P56377 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC13.55□□□□□ -0.24
AP1S2P56377 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
AP1S2P56377 TMEM78-201ENST00000323223 2175 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
AP1S2P56377 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
AP1S2P56377 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
AP1S2P56377 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC13.55□□□□□ -0.24
AP1S2P56377 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
AP1S2P56377 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
AP1S2P56377 AL445250.1-201ENST00000641671 2259 ntBASIC13.55□□□□□ -0.24
AP1S2P56377 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
AP1S2P56377 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
AP1S2P56377 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
AP1S2P56377 LINC00969-231ENST00000597482 1476 ntTSL 5 BASIC13.55□□□□□ -0.24
AP1S2P56377 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
AP1S2P56377 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
AP1S2P56377 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
AP1S2P56377 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
AP1S2P56377 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
AP1S2P56377 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
AP1S2P56377 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
AP1S2P56377 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
AP1S2P56377 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
AP1S2P56377 PES1P2-201ENST00000449745 1735 ntBASIC13.54□□□□□ -0.24
AP1S2P56377 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC13.54□□□□□ -0.24
AP1S2P56377 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
AP1S2P56377 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
AP1S2P56377 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
AP1S2P56377 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC13.54□□□□□ -0.24
AP1S2P56377 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
AP1S2P56377 AL583805.1-201ENST00000391389 531 ntBASIC13.54□□□□□ -0.24
AP1S2P56377 NME4-203ENST00000397722 1232 ntTSL 2 BASIC13.54□□□□□ -0.24
AP1S2P56377 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC13.54□□□□□ -0.24
AP1S2P56377 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC13.54□□□□□ -0.24
AP1S2P56377 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC13.54□□□□□ -0.24
AP1S2P56377 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC13.54□□□□□ -0.24
AP1S2P56377 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
AP1S2P56377 ACTG1P17-201ENST00000558391 1119 ntBASIC13.54□□□□□ -0.24
AP1S2P56377 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC13.54□□□□□ -0.24
AP1S2P56377 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC13.54□□□□□ -0.24
AP1S2P56377 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC13.54□□□□□ -0.24
AP1S2P56377 AC007326.1-201ENST00000604539 458 ntBASIC13.54□□□□□ -0.24
AP1S2P56377 GPR182-203ENST00000622922 591 ntBASIC13.54□□□□□ -0.24
AP1S2P56377 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
AP1S2P56377 DAB1-207ENST00000420954 1817 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
AP1S2P56377 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
AP1S2P56377 PPT1-213ENST00000641319 2388 ntBASIC13.54□□□□□ -0.24
AP1S2P56377 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
AP1S2P56377 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
AP1S2P56377 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC13.54□□□□□ -0.24
AP1S2P56377 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
AP1S2P56377 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
AP1S2P56377 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC13.54□□□□□ -0.24
AP1S2P56377 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC13.54□□□□□ -0.24
AP1S2P56377 AC073862.5-201ENST00000624129 2027 ntBASIC13.54□□□□□ -0.24
AP1S2P56377 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
AP1S2P56377 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
AP1S2P56377 MKRN5P-201ENST00000445263 1467 ntBASIC13.54□□□□□ -0.24
AP1S2P56377 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
AP1S2P56377 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
AP1S2P56377 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
AP1S2P56377 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC13.54□□□□□ -0.24
AP1S2P56377 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC13.54□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms