Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 AL009176.1-201ENST00000607876 650 ntBASIC10.2□□□□□ -0.78
APOC4P55056 AL031673.1-201ENST00000611460 466 ntBASIC10.2□□□□□ -0.78
APOC4P55056 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC10.2□□□□□ -0.78
APOC4P55056 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC10.2□□□□□ -0.78
APOC4P55056 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC10.2□□□□□ -0.78
APOC4P55056 AL161773.1-201ENST00000624845 863 ntBASIC10.2□□□□□ -0.78
APOC4P55056 AL132780.4-201ENST00000624870 1135 ntBASIC10.2□□□□□ -0.78
APOC4P55056 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC10.2□□□□□ -0.78
APOC4P55056 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
APOC4P55056 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
APOC4P55056 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
APOC4P55056 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
APOC4P55056 VWA5B1-201ENST00000289815 4475 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
APOC4P55056 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
APOC4P55056 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
APOC4P55056 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC10.2□□□□□ -0.78
APOC4P55056 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC10.2□□□□□ -0.78
APOC4P55056 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
APOC4P55056 LINC02486-201ENST00000604157 3000 ntBASIC10.2□□□□□ -0.78
APOC4P55056 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
APOC4P55056 BRWD1-204ENST00000380800 7605 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
APOC4P55056 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC10.19□□□□□ -0.78
APOC4P55056 AL022238.4-201ENST00000639722 4563 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
APOC4P55056 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC10.19□□□□□ -0.78
APOC4P55056 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
APOC4P55056 TGFBRAP1-203ENST00000595531 5595 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
APOC4P55056 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC10.19□□□□□ -0.78
APOC4P55056 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC10.19□□□□□ -0.78
APOC4P55056 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC10.19□□□□□ -0.78
APOC4P55056 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
APOC4P55056 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
APOC4P55056 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
APOC4P55056 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
APOC4P55056 FLNA-203ENST00000369850 8382 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
APOC4P55056 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
APOC4P55056 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC10.19□□□□□ -0.78
APOC4P55056 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
APOC4P55056 ABCA3-202ENST00000382381 6446 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
APOC4P55056 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC10.19□□□□□ -0.78
APOC4P55056 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
APOC4P55056 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
APOC4P55056 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
APOC4P55056 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
APOC4P55056 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC10.19□□□□□ -0.78
APOC4P55056 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
APOC4P55056 CXCR5-201ENST00000292174 4431 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
APOC4P55056 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
APOC4P55056 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC10.19□□□□□ -0.78
APOC4P55056 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
APOC4P55056 MRVI1-202ENST00000424001 5815 ntTSL 5 BASIC10.19□□□□□ -0.78
APOC4P55056 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
APOC4P55056 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC10.19□□□□□ -0.78
APOC4P55056 AC092978.1-202ENST00000637590 1327 ntBASIC10.19□□□□□ -0.78
APOC4P55056 GREB1-206ENST00000396123 5296 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
APOC4P55056 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
APOC4P55056 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
APOC4P55056 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
APOC4P55056 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
APOC4P55056 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC10.19□□□□□ -0.78
APOC4P55056 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC10.19□□□□□ -0.78
APOC4P55056 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
APOC4P55056 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
APOC4P55056 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC10.19□□□□□ -0.78
APOC4P55056 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC10.19□□□□□ -0.78
APOC4P55056 AC005722.1-201ENST00000431878 964 ntBASIC10.19□□□□□ -0.78
APOC4P55056 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC10.19□□□□□ -0.78
APOC4P55056 AC007279.1-201ENST00000448547 837 ntBASIC10.19□□□□□ -0.78
APOC4P55056 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC10.19□□□□□ -0.78
APOC4P55056 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC10.19□□□□□ -0.78
APOC4P55056 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC10.19□□□□□ -0.78
APOC4P55056 CFL1-206ENST00000527344 962 ntTSL 2 BASIC10.19□□□□□ -0.78
APOC4P55056 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC10.19□□□□□ -0.78
APOC4P55056 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC10.19□□□□□ -0.78
APOC4P55056 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC10.19□□□□□ -0.78
APOC4P55056 AC005777.1-201ENST00000588332 187 ntBASIC10.19□□□□□ -0.78
APOC4P55056 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC10.19□□□□□ -0.78
APOC4P55056 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
APOC4P55056 AC091769.1-201ENST00000619576 568 ntBASIC10.19□□□□□ -0.78
APOC4P55056 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
APOC4P55056 LINC01869-204ENST00000635639 1047 ntTSL 5 BASIC10.19□□□□□ -0.78
APOC4P55056 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
APOC4P55056 ZC3HAV1-201ENST00000242351 7100 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
APOC4P55056 LCA5-202ENST00000392959 4719 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
APOC4P55056 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
APOC4P55056 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
APOC4P55056 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
APOC4P55056 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC10.19□□□□□ -0.78
APOC4P55056 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
APOC4P55056 OPLAH-204ENST00000618853 4031 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
APOC4P55056 ZNF407-201ENST00000299687 7948 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
APOC4P55056 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
APOC4P55056 ZFR-201ENST00000265069 4738 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
APOC4P55056 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
APOC4P55056 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC10.19□□□□□ -0.78
APOC4P55056 DDC-213ENST00000617822 1809 ntTSL 3 BASIC10.19□□□□□ -0.78
APOC4P55056 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
APOC4P55056 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
APOC4P55056 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
APOC4P55056 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC10.18□□□□□ -0.78
APOC4P55056 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms