Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
MTHFRP42898 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
MTHFRP42898 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
MTHFRP42898 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
MTHFRP42898 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
MTHFRP42898 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
MTHFRP42898 CTSL-202ENST00000342020 933 ntTSL 2 BASIC14.51□□□□□ -0.09
MTHFRP42898 PITHD1-202ENST00000374524 1292 ntTSL 3 BASIC14.51□□□□□ -0.09
MTHFRP42898 AQP7-202ENST00000377425 1068 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
MTHFRP42898 PEMT-204ENST00000395783 1008 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
MTHFRP42898 KLHL7-204ENST00000410047 1233 ntTSL 5 BASIC14.51□□□□□ -0.09
MTHFRP42898 GULOP-201ENST00000454030 748 ntBASIC14.51□□□□□ -0.09
MTHFRP42898 ANKRD2-204ENST00000455090 1072 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
MTHFRP42898 AC025594.1-201ENST00000469533 543 ntBASIC14.51□□□□□ -0.09
MTHFRP42898 RPS18P9-201ENST00000482817 460 ntBASIC14.51□□□□□ -0.09
MTHFRP42898 AC145422.1-201ENST00000541574 544 ntTSL 3 BASIC14.51□□□□□ -0.09
MTHFRP42898 SRP14-208ENST00000560773 468 ntTSL 3 BASIC14.51□□□□□ -0.09
MTHFRP42898 AC113385.2-201ENST00000614465 762 ntBASIC14.51□□□□□ -0.09
MTHFRP42898 DNAJC10-211ENST00000640034 888 ntTSL 5 BASIC14.51□□□□□ -0.09
MTHFRP42898 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
MTHFRP42898 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
MTHFRP42898 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
MTHFRP42898 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC14.51□□□□□ -0.09
MTHFRP42898 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
MTHFRP42898 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
MTHFRP42898 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC14.51□□□□□ -0.09
MTHFRP42898 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
MTHFRP42898 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
MTHFRP42898 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
MTHFRP42898 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC14.51□□□□□ -0.09
MTHFRP42898 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC14.51□□□□□ -0.09
MTHFRP42898 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
MTHFRP42898 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
MTHFRP42898 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
MTHFRP42898 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
MTHFRP42898 MAD2L1BP-202ENST00000451025 1517 ntTSL 2 BASIC14.51□□□□□ -0.09
MTHFRP42898 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
MTHFRP42898 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC14.51□□□□□ -0.09
MTHFRP42898 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC14.5□□□□□ -0.09
MTHFRP42898 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
MTHFRP42898 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
MTHFRP42898 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
MTHFRP42898 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
MTHFRP42898 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC14.5□□□□□ -0.09
MTHFRP42898 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
MTHFRP42898 SFXN4-201ENST00000355697 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
MTHFRP42898 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
MTHFRP42898 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
MTHFRP42898 AC020931.1-201ENST00000589622 1346 ntBASIC14.5□□□□□ -0.09
MTHFRP42898 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
MTHFRP42898 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
MTHFRP42898 COX8A-201ENST00000314133 507 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
MTHFRP42898 EEF1DP2-201ENST00000433698 843 ntBASIC14.5□□□□□ -0.09
MTHFRP42898 SOD2-205ENST00000444946 917 ntTSL 2 BASIC14.5□□□□□ -0.09
MTHFRP42898 HIST1H2APS2-201ENST00000454426 370 ntBASIC14.5□□□□□ -0.09
MTHFRP42898 AC022447.6-201ENST00000515522 438 ntBASIC14.5□□□□□ -0.09
MTHFRP42898 EVX1-AS-203ENST00000519218 554 ntTSL 4 BASIC14.5□□□□□ -0.09
MTHFRP42898 EXTL3-AS1-203ENST00000520023 780 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
MTHFRP42898 AF111169.3-201ENST00000553991 756 ntTSL 5 BASIC14.5□□□□□ -0.09
MTHFRP42898 AL359219.1-201ENST00000556311 934 ntBASIC14.5□□□□□ -0.09
MTHFRP42898 AC092756.1-201ENST00000560248 448 ntTSL 3 BASIC14.5□□□□□ -0.09
MTHFRP42898 HIST2H4A-201ENST00000578186 583 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
MTHFRP42898 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
MTHFRP42898 AL645608.7-201ENST00000607769 351 ntTSL 4 BASIC14.5□□□□□ -0.09
MTHFRP42898 MIAT_exon5_3.1-201ENST00000613656 377 ntBASIC14.5□□□□□ -0.09
MTHFRP42898 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
MTHFRP42898 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
MTHFRP42898 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
MTHFRP42898 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC14.5□□□□□ -0.09
MTHFRP42898 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
MTHFRP42898 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC14.5□□□□□ -0.09
MTHFRP42898 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
MTHFRP42898 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
MTHFRP42898 ARHGAP23P1-201ENST00000562773 1937 ntBASIC14.5□□□□□ -0.09
MTHFRP42898 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
MTHFRP42898 TBC1D3P2-201ENST00000339120 1513 ntTSL 2 BASIC14.5□□□□□ -0.09
MTHFRP42898 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
MTHFRP42898 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC14.5□□□□□ -0.09
MTHFRP42898 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
MTHFRP42898 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
MTHFRP42898 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
MTHFRP42898 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC14.5□□□□□ -0.09
MTHFRP42898 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
MTHFRP42898 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
MTHFRP42898 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
MTHFRP42898 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
MTHFRP42898 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
MTHFRP42898 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC14.49□□□□□ -0.09
MTHFRP42898 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
MTHFRP42898 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC14.49□□□□□ -0.09
MTHFRP42898 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC14.49□□□□□ -0.09
MTHFRP42898 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
MTHFRP42898 FAM9B-201ENST00000327220 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
MTHFRP42898 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
MTHFRP42898 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
MTHFRP42898 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
MTHFRP42898 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
MTHFRP42898 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
MTHFRP42898 U3.5-201ENST00000363448 216 ntBASIC14.49□□□□□ -0.09
MTHFRP42898 VASH2-205ENST00000366967 1206 ntTSL 2 BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms