Protein–RNA interactions for Protein: P31025

LCN1, Lipocalin-1, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P31025 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
LCN1P31025 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LCN1P31025 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
LCN1P31025 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LCN1P31025 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC12.93□□□□□ -0.34
LCN1P31025 BTBD9-206ENST00000481247 8525 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
LCN1P31025 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LCN1P31025 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LCN1P31025 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LCN1P31025 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
LCN1P31025 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LCN1P31025 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
LCN1P31025 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
LCN1P31025 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC12.93□□□□□ -0.34
LCN1P31025 ACTG1P2-201ENST00000415776 1125 ntBASIC12.93□□□□□ -0.34
LCN1P31025 ACTG1P11-201ENST00000425411 1125 ntBASIC12.93□□□□□ -0.34
LCN1P31025 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
LCN1P31025 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC12.93□□□□□ -0.34
LCN1P31025 MSRA-203ENST00000441698 788 ntTSL 2 BASIC12.93□□□□□ -0.34
LCN1P31025 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
LCN1P31025 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC12.93□□□□□ -0.34
LCN1P31025 CD164-210ENST00000512821 964 ntTSL 2 BASIC12.93□□□□□ -0.34
LCN1P31025 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
LCN1P31025 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC12.93□□□□□ -0.34
LCN1P31025 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
LCN1P31025 RN7SL665P-201ENST00000578793 300 ntBASIC12.93□□□□□ -0.34
LCN1P31025 MIR3619-201ENST00000579667 83 ntBASIC12.93□□□□□ -0.34
LCN1P31025 NAT9-211ENST00000580632 799 ntTSL 3 BASIC12.93□□□□□ -0.34
LCN1P31025 MIR4754-201ENST00000582477 89 ntBASIC12.93□□□□□ -0.34
LCN1P31025 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC12.93□□□□□ -0.34
LCN1P31025 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
LCN1P31025 MIR6787-201ENST00000616675 61 ntBASIC12.93□□□□□ -0.34
LCN1P31025 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC12.93□□□□□ -0.34
LCN1P31025 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
LCN1P31025 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LCN1P31025 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
LCN1P31025 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
LCN1P31025 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC12.93□□□□□ -0.34
LCN1P31025 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
LCN1P31025 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC12.93□□□□□ -0.34
LCN1P31025 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
LCN1P31025 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
LCN1P31025 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
LCN1P31025 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
LCN1P31025 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LCN1P31025 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LCN1P31025 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
LCN1P31025 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC12.93□□□□□ -0.34
LCN1P31025 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC12.93□□□□□ -0.34
LCN1P31025 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LCN1P31025 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
LCN1P31025 AC008132.1-202ENST00000342005 1389 ntBASIC12.93□□□□□ -0.34
LCN1P31025 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LCN1P31025 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
LCN1P31025 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LCN1P31025 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LCN1P31025 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
LCN1P31025 AC093462.1-201ENST00000621167 1683 ntBASIC12.93□□□□□ -0.34
LCN1P31025 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
LCN1P31025 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LCN1P31025 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC12.92□□□□□ -0.34
LCN1P31025 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
LCN1P31025 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
LCN1P31025 NCLP1-201ENST00000445357 1963 ntBASIC12.92□□□□□ -0.34
LCN1P31025 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
LCN1P31025 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC12.92□□□□□ -0.34
LCN1P31025 AC004241.5-201ENST00000623870 2448 ntBASIC12.92□□□□□ -0.34
LCN1P31025 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
LCN1P31025 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LCN1P31025 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LCN1P31025 AF013593.1-201ENST00000458074 1487 ntBASIC12.92□□□□□ -0.34
LCN1P31025 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC12.92□□□□□ -0.34
LCN1P31025 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LCN1P31025 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LCN1P31025 FMO6P-201ENST00000236166 1620 ntBASIC12.92□□□□□ -0.34
LCN1P31025 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LCN1P31025 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LCN1P31025 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC12.92□□□□□ -0.34
LCN1P31025 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LCN1P31025 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC12.92□□□□□ -0.34
LCN1P31025 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
LCN1P31025 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
LCN1P31025 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LCN1P31025 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
LCN1P31025 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LCN1P31025 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LCN1P31025 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LCN1P31025 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LCN1P31025 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC12.92□□□□□ -0.34
LCN1P31025 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LCN1P31025 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
LCN1P31025 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LCN1P31025 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
LCN1P31025 MIR645-201ENST00000385283 94 ntBASIC12.92□□□□□ -0.34
LCN1P31025 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LCN1P31025 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC12.92□□□□□ -0.34
LCN1P31025 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC12.92□□□□□ -0.34
LCN1P31025 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC12.92□□□□□ -0.34
LCN1P31025 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LCN1P31025 AC073150.1-201ENST00000450406 1084 ntBASIC12.92□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms