Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC11.93□□□□□ -0.5
CCL1P22362 SLC4A11-207ENST00000539553 2832 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
CCL1P22362 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC11.93□□□□□ -0.5
CCL1P22362 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
CCL1P22362 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC11.93□□□□□ -0.5
CCL1P22362 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC11.93□□□□□ -0.5
CCL1P22362 LINC00943-204ENST00000537374 1688 ntTSL 5 BASIC11.93□□□□□ -0.5
CCL1P22362 AL157791.1-201ENST00000553667 1699 ntBASIC11.93□□□□□ -0.5
CCL1P22362 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC11.93□□□□□ -0.5
CCL1P22362 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CCL1P22362 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
CCL1P22362 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
CCL1P22362 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CCL1P22362 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC11.93□□□□□ -0.5
CCL1P22362 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CCL1P22362 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CCL1P22362 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC11.93□□□□□ -0.5
CCL1P22362 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC11.93□□□□□ -0.5
CCL1P22362 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC11.93□□□□□ -0.5
CCL1P22362 AC131212.3-201ENST00000624087 4219 ntBASIC11.93□□□□□ -0.5
CCL1P22362 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC11.93□□□□□ -0.5
CCL1P22362 NUDT9-203ENST00000473942 2458 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CCL1P22362 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC11.93□□□□□ -0.5
CCL1P22362 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CCL1P22362 ETNPPL-202ENST00000411864 2028 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CCL1P22362 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
CCL1P22362 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC11.92□□□□□ -0.5
CCL1P22362 AC022364.1-202ENST00000617468 2409 ntBASIC11.92□□□□□ -0.5
CCL1P22362 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC11.92□□□□□ -0.5
CCL1P22362 NDRG2-201ENST00000298684 1784 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CCL1P22362 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CCL1P22362 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
CCL1P22362 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CCL1P22362 AL133338.1-201ENST00000565695 1517 ntBASIC11.92□□□□□ -0.5
CCL1P22362 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC11.92□□□□□ -0.5
CCL1P22362 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC11.92□□□□□ -0.5
CCL1P22362 DIO1-216ENST00000613679 1856 ntAPPRIS ALT1 TSL 5 BASIC11.92□□□□□ -0.5
CCL1P22362 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
CCL1P22362 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CCL1P22362 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CCL1P22362 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CCL1P22362 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
CCL1P22362 SSR4P1-201ENST00000415143 412 ntBASIC11.92□□□□□ -0.5
CCL1P22362 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC11.92□□□□□ -0.5
CCL1P22362 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CCL1P22362 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CCL1P22362 RN7SL788P-201ENST00000460504 316 ntBASIC11.92□□□□□ -0.5
CCL1P22362 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC11.92□□□□□ -0.5
CCL1P22362 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
CCL1P22362 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CCL1P22362 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC11.92□□□□□ -0.5
CCL1P22362 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC11.92□□□□□ -0.5
CCL1P22362 AL049840.2-201ENST00000602722 535 ntBASIC11.92□□□□□ -0.5
CCL1P22362 Six3os1_5.1-201ENST00000611000 271 ntBASIC11.92□□□□□ -0.5
CCL1P22362 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC11.92□□□□□ -0.5
CCL1P22362 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC11.92□□□□□ -0.5
CCL1P22362 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC11.92□□□□□ -0.5
CCL1P22362 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CCL1P22362 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
CCL1P22362 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
CCL1P22362 GPATCH2L-202ENST00000312858 2438 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
CCL1P22362 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
CCL1P22362 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
CCL1P22362 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
CCL1P22362 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
CCL1P22362 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC11.92□□□□□ -0.5
CCL1P22362 KRT8P31-201ENST00000504812 1408 ntBASIC11.92□□□□□ -0.5
CCL1P22362 MEIS2-215ENST00000559561 1442 ntAPPRIS ALT1 TSL 5 BASIC11.92□□□□□ -0.5
CCL1P22362 DPP8-201ENST00000300141 3139 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CCL1P22362 STX3-207ENST00000633708 3111 ntTSL 5 BASIC11.92□□□□□ -0.5
CCL1P22362 AC007336.3-201ENST00000623886 2160 ntBASIC11.92□□□□□ -0.5
CCL1P22362 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CCL1P22362 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CCL1P22362 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CCL1P22362 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
CCL1P22362 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CCL1P22362 DNAJC30-201ENST00000395176 2485 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
CCL1P22362 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC11.92□□□□□ -0.5
CCL1P22362 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC11.92□□□□□ -0.5
CCL1P22362 AL513497.1-201ENST00000624273 2083 ntBASIC11.91□□□□□ -0.5
CCL1P22362 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
CCL1P22362 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
CCL1P22362 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
CCL1P22362 MBOAT4-201ENST00000320542 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CCL1P22362 HNRNPLP1-201ENST00000421896 1501 ntBASIC11.91□□□□□ -0.5
CCL1P22362 GPR39-201ENST00000329321 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CCL1P22362 C1QTNF9-202ENST00000382071 1854 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
CCL1P22362 TXNDC17-201ENST00000250101 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CCL1P22362 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
CCL1P22362 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CCL1P22362 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
CCL1P22362 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
CCL1P22362 SLC39A11-201ENST00000255559 2737 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
CCL1P22362 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC11.91□□□□□ -0.5
CCL1P22362 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
CCL1P22362 SLC23A1-202ENST00000353963 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CCL1P22362 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC11.91□□□□□ -0.5
CCL1P22362 MUC20-203ENST00000436408 2463 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
CCL1P22362 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CCL1P22362 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms