Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD48P09326 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC14.39□□□□□ -0.11
CD48P09326 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD48P09326 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC14.39□□□□□ -0.11
CD48P09326 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CD48P09326 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD48P09326 FAM213A-204ENST00000372188 829 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CD48P09326 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CD48P09326 MIR769-201ENST00000390225 118 ntBASIC14.39□□□□□ -0.11
CD48P09326 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
CD48P09326 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC14.39□□□□□ -0.11
CD48P09326 AC098934.1-203ENST00000442868 1262 ntBASIC14.39□□□□□ -0.11
CD48P09326 AC008723.1-201ENST00000506922 207 ntBASIC14.39□□□□□ -0.11
CD48P09326 ADM-202ENST00000524948 584 ntTSL 2 BASIC14.39□□□□□ -0.11
CD48P09326 AC020922.3-201ENST00000595064 547 ntBASIC14.39□□□□□ -0.11
CD48P09326 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC14.39□□□□□ -0.11
CD48P09326 AP001505.2-201ENST00000616815 443 ntBASIC14.39□□□□□ -0.11
CD48P09326 MIR6799-201ENST00000620297 69 ntBASIC14.39□□□□□ -0.11
CD48P09326 AC007718.1-201ENST00000621078 280 ntBASIC14.39□□□□□ -0.11
CD48P09326 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD48P09326 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CD48P09326 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD48P09326 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD48P09326 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD48P09326 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD48P09326 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
CD48P09326 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CD48P09326 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CD48P09326 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD48P09326 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CD48P09326 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD48P09326 LINC01679-201ENST00000442815 2798 ntTSL 3 BASIC14.39□□□□□ -0.11
CD48P09326 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CD48P09326 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CD48P09326 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CD48P09326 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC14.38□□□□□ -0.11
CD48P09326 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CD48P09326 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CD48P09326 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CD48P09326 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CD48P09326 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CD48P09326 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CD48P09326 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CD48P09326 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CD48P09326 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC14.38□□□□□ -0.11
CD48P09326 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CD48P09326 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CD48P09326 GOLGA8UP-201ENST00000527159 1755 ntBASIC14.38□□□□□ -0.11
CD48P09326 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CD48P09326 KLKP1-203ENST00000600104 1532 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CD48P09326 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CD48P09326 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CD48P09326 NME4-203ENST00000397722 1232 ntTSL 2 BASIC14.38□□□□□ -0.11
CD48P09326 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CD48P09326 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC14.38□□□□□ -0.11
CD48P09326 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC14.38□□□□□ -0.11
CD48P09326 Z97180.1-201ENST00000445173 988 ntBASIC14.38□□□□□ -0.11
CD48P09326 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC14.38□□□□□ -0.11
CD48P09326 RN7SL788P-201ENST00000460504 316 ntBASIC14.38□□□□□ -0.11
CD48P09326 RN7SL258P-201ENST00000478664 300 ntBASIC14.38□□□□□ -0.11
CD48P09326 TSACC-208ENST00000481479 741 ntTSL 2 BASIC14.38□□□□□ -0.11
CD48P09326 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC14.38□□□□□ -0.11
CD48P09326 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC14.38□□□□□ -0.11
CD48P09326 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CD48P09326 RN7SL574P-201ENST00000581512 297 ntBASIC14.38□□□□□ -0.11
CD48P09326 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC14.38□□□□□ -0.11
CD48P09326 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC14.38□□□□□ -0.11
CD48P09326 AC009145.4-201ENST00000625119 1294 ntBASIC14.38□□□□□ -0.11
CD48P09326 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC14.38□□□□□ -0.11
CD48P09326 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CD48P09326 RHPN1-AS1-201ENST00000518049 1918 ntBASIC14.38□□□□□ -0.11
CD48P09326 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CD48P09326 ZFYVE19-215ENST00000570108 1669 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CD48P09326 DRD2-210ENST00000544518 2473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CD48P09326 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC14.38□□□□□ -0.11
CD48P09326 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CD48P09326 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC14.38□□□□□ -0.11
CD48P09326 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC14.38□□□□□ -0.11
CD48P09326 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC14.38□□□□□ -0.11
CD48P09326 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CD48P09326 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC14.38□□□□□ -0.11
CD48P09326 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC14.38□□□□□ -0.11
CD48P09326 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CD48P09326 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC14.37□□□□□ -0.11
CD48P09326 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CD48P09326 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
CD48P09326 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CD48P09326 AC007336.3-201ENST00000623886 2160 ntBASIC14.37□□□□□ -0.11
CD48P09326 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC14.37□□□□□ -0.11
CD48P09326 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CD48P09326 RPA2-203ENST00000373912 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CD48P09326 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CD48P09326 CAP2P1-201ENST00000557743 1390 ntBASIC14.37□□□□□ -0.11
CD48P09326 SMARCA2-254ENST00000636903 2471 ntTSL 5 BASIC14.37□□□□□ -0.11
CD48P09326 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CD48P09326 AC021218.1-201ENST00000377722 2536 ntTSL 2 BASIC14.37□□□□□ -0.11
CD48P09326 TP73-207ENST00000378290 1831 ntTSL 2 BASIC14.37□□□□□ -0.11
CD48P09326 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC14.37□□□□□ -0.11
CD48P09326 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CD48P09326 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms