Protein–RNA interactions for Protein: Q8TC41

RNF217, Probable E3 ubiquitin-protein ligase RNF217, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF217Q8TC41 CEACAM20-206ENST00000621342 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
RNF217Q8TC41 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
RNF217Q8TC41 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RNF217Q8TC41 PGBD1-201ENST00000259883 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RNF217Q8TC41 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC13.62□□□□□ -0.23
RNF217Q8TC41 SNX22-201ENST00000325881 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RNF217Q8TC41 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC13.62□□□□□ -0.23
RNF217Q8TC41 LDLRAD3-201ENST00000315571 3798 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RNF217Q8TC41 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RNF217Q8TC41 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RNF217Q8TC41 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RNF217Q8TC41 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC13.62□□□□□ -0.23
RNF217Q8TC41 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC13.62□□□□□ -0.23
RNF217Q8TC41 ARAP3-207ENST00000626478 4928 ntTSL 5 BASIC13.62□□□□□ -0.23
RNF217Q8TC41 MCAM-201ENST00000264036 3313 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RNF217Q8TC41 C1S-221ENST00000617865 2844 ntTSL 5 BASIC13.62□□□□□ -0.23
RNF217Q8TC41 MFSD8-241ENST00000641686 4991 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
RNF217Q8TC41 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RNF217Q8TC41 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RNF217Q8TC41 AC134312.5-201ENST00000568031 1313 ntBASIC13.62□□□□□ -0.23
RNF217Q8TC41 NUP58-206ENST00000463407 6360 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RNF217Q8TC41 SLC6A6-204ENST00000613060 6526 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RNF217Q8TC41 SLC6A6-210ENST00000622186 6528 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RNF217Q8TC41 HK2P1-201ENST00000447818 2737 ntBASIC13.62□□□□□ -0.23
RNF217Q8TC41 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RNF217Q8TC41 ZHX1-206ENST00000522655 3357 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
RNF217Q8TC41 SPTB-202ENST00000389720 6321 ntTSL 5 BASIC13.61□□□□□ -0.23
RNF217Q8TC41 MYO9A-202ENST00000424560 4008 ntTSL 5 BASIC13.61□□□□□ -0.23
RNF217Q8TC41 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
RNF217Q8TC41 AC003102.2-201ENST00000589195 1469 ntBASIC13.61□□□□□ -0.23
RNF217Q8TC41 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RNF217Q8TC41 SKP2-209ENST00000620197 3255 ntTSL 2 BASIC13.61□□□□□ -0.23
RNF217Q8TC41 CPT1C-217ENST00000598293 2767 ntAPPRIS P3 TSL 2 BASIC13.61□□□□□ -0.23
RNF217Q8TC41 GPR173-201ENST00000332582 4485 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RNF217Q8TC41 NME1-209ENST00000511355 1645 ntTSL 5 BASIC13.61□□□□□ -0.23
RNF217Q8TC41 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC13.61□□□□□ -0.23
RNF217Q8TC41 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RNF217Q8TC41 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC13.61□□□□□ -0.23
RNF217Q8TC41 CAV1-209ENST00000614113 3201 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RNF217Q8TC41 PPP4R3B-203ENST00000611717 5243 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
RNF217Q8TC41 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
RNF217Q8TC41 PTCH1-207ENST00000429896 6563 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RNF217Q8TC41 KCNJ5-202ENST00000529694 5940 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RNF217Q8TC41 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC13.61□□□□□ -0.23
RNF217Q8TC41 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RNF217Q8TC41 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RNF217Q8TC41 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RNF217Q8TC41 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RNF217Q8TC41 NSL1-201ENST00000366976 722 ntTSL 2 BASIC13.61□□□□□ -0.23
RNF217Q8TC41 ACKR1-201ENST00000368121 1240 ntBASIC13.61□□□□□ -0.23
RNF217Q8TC41 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RNF217Q8TC41 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RNF217Q8TC41 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RNF217Q8TC41 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
RNF217Q8TC41 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
RNF217Q8TC41 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC13.61□□□□□ -0.23
RNF217Q8TC41 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC13.61□□□□□ -0.23
RNF217Q8TC41 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC13.61□□□□□ -0.23
RNF217Q8TC41 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC13.61□□□□□ -0.23
RNF217Q8TC41 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
RNF217Q8TC41 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC13.61□□□□□ -0.23
RNF217Q8TC41 XRCC3-202ENST00000553264 3018 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
RNF217Q8TC41 ESYT1-202ENST00000394048 4388 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
RNF217Q8TC41 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RNF217Q8TC41 ZSCAN20-202ENST00000373413 2367 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RNF217Q8TC41 PIP5K1A-203ENST00000368890 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
RNF217Q8TC41 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC13.61□□□□□ -0.23
RNF217Q8TC41 VANGL1-201ENST00000310260 2265 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
RNF217Q8TC41 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RNF217Q8TC41 ARAP3-203ENST00000508305 4927 ntTSL 2 BASIC13.61□□□□□ -0.23
RNF217Q8TC41 FAM196A-201ENST00000424811 3149 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RNF217Q8TC41 SMG6-203ENST00000536871 1865 ntTSL 2 BASIC13.61□□□□□ -0.23
RNF217Q8TC41 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RNF217Q8TC41 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
RNF217Q8TC41 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RNF217Q8TC41 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
RNF217Q8TC41 FMO1-203ENST00000402921 2003 ntTSL 2 BASIC13.61□□□□□ -0.23
RNF217Q8TC41 AC124319.4-201ENST00000622931 2161 ntBASIC13.61□□□□□ -0.23
RNF217Q8TC41 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RNF217Q8TC41 COBLL1-225ENST00000629362 3868 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
RNF217Q8TC41 RGPD5-203ENST00000393283 3304 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RNF217Q8TC41 STAT3-202ENST00000389272 2615 ntTSL 2 BASIC13.6□□□□□ -0.23
RNF217Q8TC41 FAM86JP-201ENST00000467239 1910 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RNF217Q8TC41 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC13.6□□□□□ -0.23
RNF217Q8TC41 LINC00969-213ENST00000445707 2363 ntTSL 2 BASIC13.6□□□□□ -0.23
RNF217Q8TC41 TGFBI-201ENST00000442011 2804 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RNF217Q8TC41 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC13.6□□□□□ -0.23
RNF217Q8TC41 MSTO2P-201ENST00000314835 1709 ntBASIC13.6□□□□□ -0.23
RNF217Q8TC41 DGCR5-201ENST00000399539 862 ntBASIC13.6□□□□□ -0.23
RNF217Q8TC41 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC13.6□□□□□ -0.23
RNF217Q8TC41 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC13.6□□□□□ -0.23
RNF217Q8TC41 TLE1P1-201ENST00000422965 589 ntBASIC13.6□□□□□ -0.23
RNF217Q8TC41 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC13.6□□□□□ -0.23
RNF217Q8TC41 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC13.6□□□□□ -0.23
RNF217Q8TC41 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
RNF217Q8TC41 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RNF217Q8TC41 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
RNF217Q8TC41 CFL1-212ENST00000531413 636 ntTSL 3 BASIC13.6□□□□□ -0.23
RNF217Q8TC41 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC13.6□□□□□ -0.23
RNF217Q8TC41 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms