Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
BEST2Q8NFU1 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC14.92□□□□□ -0.02
BEST2Q8NFU1 PPP1R32-201ENST00000338608 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
BEST2Q8NFU1 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC14.92□□□□□ -0.02
BEST2Q8NFU1 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC14.92□□□□□ -0.02
BEST2Q8NFU1 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
BEST2Q8NFU1 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
BEST2Q8NFU1 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
BEST2Q8NFU1 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC14.91□□□□□ -0.02
BEST2Q8NFU1 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
BEST2Q8NFU1 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC14.91□□□□□ -0.02
BEST2Q8NFU1 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC14.91□□□□□ -0.02
BEST2Q8NFU1 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
BEST2Q8NFU1 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
BEST2Q8NFU1 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
BEST2Q8NFU1 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
BEST2Q8NFU1 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
BEST2Q8NFU1 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
BEST2Q8NFU1 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
BEST2Q8NFU1 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
BEST2Q8NFU1 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
BEST2Q8NFU1 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
BEST2Q8NFU1 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC14.91□□□□□ -0.02
BEST2Q8NFU1 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
BEST2Q8NFU1 SNORA50C-201ENST00000408535 133 ntBASIC14.91□□□□□ -0.02
BEST2Q8NFU1 ACTBP14-201ENST00000411655 1089 ntBASIC14.91□□□□□ -0.02
BEST2Q8NFU1 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC14.91□□□□□ -0.02
BEST2Q8NFU1 PIN4P1-201ENST00000451079 396 ntBASIC14.91□□□□□ -0.02
BEST2Q8NFU1 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC14.91□□□□□ -0.02
BEST2Q8NFU1 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
BEST2Q8NFU1 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC14.91□□□□□ -0.02
BEST2Q8NFU1 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC14.91□□□□□ -0.02
BEST2Q8NFU1 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC14.91□□□□□ -0.02
BEST2Q8NFU1 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
BEST2Q8NFU1 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
BEST2Q8NFU1 AL356740.1-201ENST00000602192 1297 ntBASIC14.91□□□□□ -0.02
BEST2Q8NFU1 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC14.91□□□□□ -0.02
BEST2Q8NFU1 SNORA50.1-201ENST00000628590 135 ntBASIC14.91□□□□□ -0.02
BEST2Q8NFU1 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC14.91□□□□□ -0.02
BEST2Q8NFU1 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
BEST2Q8NFU1 CNTNAP3P2-201ENST00000617175 3861 ntBASIC14.91□□□□□ -0.02
BEST2Q8NFU1 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
BEST2Q8NFU1 CETP-203ENST00000566128 1733 ntTSL 5 BASIC14.91□□□□□ -0.02
BEST2Q8NFU1 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC14.91□□□□□ -0.02
BEST2Q8NFU1 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
BEST2Q8NFU1 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC14.91□□□□□ -0.02
BEST2Q8NFU1 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
BEST2Q8NFU1 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
BEST2Q8NFU1 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
BEST2Q8NFU1 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC14.91□□□□□ -0.02
BEST2Q8NFU1 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC14.91□□□□□ -0.02
BEST2Q8NFU1 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC14.91□□□□□ -0.02
BEST2Q8NFU1 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
BEST2Q8NFU1 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
BEST2Q8NFU1 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.91□□□□□ -0.02
BEST2Q8NFU1 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
BEST2Q8NFU1 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC14.91□□□□□ -0.02
BEST2Q8NFU1 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
BEST2Q8NFU1 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
BEST2Q8NFU1 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
BEST2Q8NFU1 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
BEST2Q8NFU1 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
BEST2Q8NFU1 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
BEST2Q8NFU1 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
BEST2Q8NFU1 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
BEST2Q8NFU1 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
BEST2Q8NFU1 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
BEST2Q8NFU1 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC14.9□□□□□ -0.02
BEST2Q8NFU1 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
BEST2Q8NFU1 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC14.9□□□□□ -0.02
BEST2Q8NFU1 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
BEST2Q8NFU1 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
BEST2Q8NFU1 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
BEST2Q8NFU1 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
BEST2Q8NFU1 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
BEST2Q8NFU1 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
BEST2Q8NFU1 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC14.9□□□□□ -0.02
BEST2Q8NFU1 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC14.9□□□□□ -0.02
BEST2Q8NFU1 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
BEST2Q8NFU1 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
BEST2Q8NFU1 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
BEST2Q8NFU1 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
BEST2Q8NFU1 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
BEST2Q8NFU1 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC14.9□□□□□ -0.02
BEST2Q8NFU1 ABCD1P4-201ENST00000399687 604 ntBASIC14.9□□□□□ -0.02
BEST2Q8NFU1 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC14.9□□□□□ -0.02
BEST2Q8NFU1 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC14.9□□□□□ -0.02
BEST2Q8NFU1 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC14.9□□□□□ -0.02
BEST2Q8NFU1 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC14.9□□□□□ -0.02
BEST2Q8NFU1 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC14.9□□□□□ -0.02
BEST2Q8NFU1 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC14.9□□□□□ -0.02
BEST2Q8NFU1 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC14.9□□□□□ -0.02
BEST2Q8NFU1 AC138466.5-201ENST00000624002 808 ntBASIC14.9□□□□□ -0.02
BEST2Q8NFU1 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
BEST2Q8NFU1 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC14.9□□□□□ -0.02
BEST2Q8NFU1 AC072061.1-201ENST00000569710 2234 ntBASIC14.9□□□□□ -0.02
BEST2Q8NFU1 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC14.9□□□□□ -0.02
BEST2Q8NFU1 Z98885.3-201ENST00000624882 1757 ntBASIC14.9□□□□□ -0.02
BEST2Q8NFU1 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
BEST2Q8NFU1 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms