Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CCDC168Q8NDH2 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC11.49□□□□□ -0.57
CCDC168Q8NDH2 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC11.49□□□□□ -0.57
CCDC168Q8NDH2 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
CCDC168Q8NDH2 GAPDHS-201ENST00000222286 1489 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CCDC168Q8NDH2 SLIRP-201ENST00000238688 394 ntAPPRIS P3 TSL 2 BASIC11.49□□□□□ -0.57
CCDC168Q8NDH2 NR1I3-201ENST00000367979 1074 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
CCDC168Q8NDH2 NR1I3-207ENST00000367985 1074 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
CCDC168Q8NDH2 AC064853.1-201ENST00000413096 540 ntTSL 4 BASIC11.49□□□□□ -0.57
CCDC168Q8NDH2 CD37-203ENST00000426897 1204 ntTSL 2 BASIC11.49□□□□□ -0.57
CCDC168Q8NDH2 SMCR2-201ENST00000456090 564 ntTSL 2 BASIC11.49□□□□□ -0.57
CCDC168Q8NDH2 NR1I3-225ENST00000508387 634 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
CCDC168Q8NDH2 NEMF-210ENST00000556672 590 ntTSL 2 BASIC11.49□□□□□ -0.57
CCDC168Q8NDH2 SNX20-205ENST00000610485 557 ntTSL 5 BASIC11.49□□□□□ -0.57
CCDC168Q8NDH2 TNFRSF10A-204ENST00000613472 978 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
CCDC168Q8NDH2 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CCDC168Q8NDH2 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
CCDC168Q8NDH2 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CCDC168Q8NDH2 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC11.49□□□□□ -0.57
CCDC168Q8NDH2 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
CCDC168Q8NDH2 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
CCDC168Q8NDH2 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC11.49□□□□□ -0.57
CCDC168Q8NDH2 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CCDC168Q8NDH2 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
CCDC168Q8NDH2 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CCDC168Q8NDH2 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC11.49□□□□□ -0.57
CCDC168Q8NDH2 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
CCDC168Q8NDH2 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
CCDC168Q8NDH2 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
CCDC168Q8NDH2 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
CCDC168Q8NDH2 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
CCDC168Q8NDH2 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CCDC168Q8NDH2 DMC1-207ENST00000616615 1595 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
CCDC168Q8NDH2 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CCDC168Q8NDH2 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CCDC168Q8NDH2 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CCDC168Q8NDH2 ZSCAN21-203ENST00000456748 1904 ntTSL 5 BASIC11.49□□□□□ -0.57
CCDC168Q8NDH2 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CCDC168Q8NDH2 IGKV3-11-201ENST00000483158 392 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
CCDC168Q8NDH2 PRSS55-203ENST00000522210 1005 ntTSL 2 BASIC11.49□□□□□ -0.57
CCDC168Q8NDH2 AC126177.4-201ENST00000547452 731 ntTSL 5 BASIC11.49□□□□□ -0.57
CCDC168Q8NDH2 AL592146.2-201ENST00000565388 444 ntTSL 5 BASIC11.49□□□□□ -0.57
CCDC168Q8NDH2 RN7SL162P-201ENST00000579233 292 ntBASIC11.49□□□□□ -0.57
CCDC168Q8NDH2 UBA52-213ENST00000599551 707 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
CCDC168Q8NDH2 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
CCDC168Q8NDH2 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
CCDC168Q8NDH2 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC11.49□□□□□ -0.57
CCDC168Q8NDH2 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
CCDC168Q8NDH2 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CCDC168Q8NDH2 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC11.49□□□□□ -0.57
CCDC168Q8NDH2 IMPDH1P5-201ENST00000439688 1540 ntBASIC11.49□□□□□ -0.57
CCDC168Q8NDH2 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC11.49□□□□□ -0.57
CCDC168Q8NDH2 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
CCDC168Q8NDH2 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC11.49□□□□□ -0.57
CCDC168Q8NDH2 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CCDC168Q8NDH2 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC11.49□□□□□ -0.57
CCDC168Q8NDH2 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC11.49□□□□□ -0.57
CCDC168Q8NDH2 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CCDC168Q8NDH2 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CCDC168Q8NDH2 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CCDC168Q8NDH2 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
CCDC168Q8NDH2 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
CCDC168Q8NDH2 AC138035.3-201ENST00000622706 2791 ntBASIC11.48□□□□□ -0.57
CCDC168Q8NDH2 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CCDC168Q8NDH2 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CCDC168Q8NDH2 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
CCDC168Q8NDH2 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CCDC168Q8NDH2 RNF4-216ENST00000511859 1373 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CCDC168Q8NDH2 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
CCDC168Q8NDH2 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CCDC168Q8NDH2 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CCDC168Q8NDH2 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CCDC168Q8NDH2 SLC1A5-202ENST00000434726 1872 ntTSL 2 BASIC11.48□□□□□ -0.57
CCDC168Q8NDH2 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CCDC168Q8NDH2 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CCDC168Q8NDH2 GAST-201ENST00000329402 470 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CCDC168Q8NDH2 CD8B-202ENST00000349455 849 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CCDC168Q8NDH2 AC007383.2-201ENST00000420509 752 ntTSL 2 BASIC11.48□□□□□ -0.57
CCDC168Q8NDH2 RPL13AP5-201ENST00000439189 612 ntBASIC11.48□□□□□ -0.57
CCDC168Q8NDH2 ATP5G1P7-201ENST00000444398 400 ntBASIC11.48□□□□□ -0.57
CCDC168Q8NDH2 LRRC75A-AS1-208ENST00000480811 968 ntTSL 2 BASIC11.48□□□□□ -0.57
CCDC168Q8NDH2 AP001922.6-201ENST00000532553 546 ntTSL 5 BASIC11.48□□□□□ -0.57
CCDC168Q8NDH2 AP000439.2-201ENST00000542064 726 ntTSL 2 BASIC11.48□□□□□ -0.57
CCDC168Q8NDH2 IFI27L1-205ENST00000554544 406 ntTSL 3 BASIC11.48□□□□□ -0.57
CCDC168Q8NDH2 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CCDC168Q8NDH2 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
CCDC168Q8NDH2 AC015813.5-201ENST00000624641 1514 ntBASIC11.48□□□□□ -0.57
CCDC168Q8NDH2 RN7SL832P-201ENST00000607781 1756 ntBASIC11.48□□□□□ -0.57
CCDC168Q8NDH2 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CCDC168Q8NDH2 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CCDC168Q8NDH2 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CCDC168Q8NDH2 CALU-202ENST00000449187 2438 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CCDC168Q8NDH2 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CCDC168Q8NDH2 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CCDC168Q8NDH2 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC11.48□□□□□ -0.57
CCDC168Q8NDH2 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CCDC168Q8NDH2 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
CCDC168Q8NDH2 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC11.48□□□□□ -0.57
CCDC168Q8NDH2 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CCDC168Q8NDH2 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms