Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC14.03□□□□□ -0.16
LYSMD3Q7Z3D4 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC14.03□□□□□ -0.16
LYSMD3Q7Z3D4 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC14.03□□□□□ -0.16
LYSMD3Q7Z3D4 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
LYSMD3Q7Z3D4 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
LYSMD3Q7Z3D4 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LYSMD3Q7Z3D4 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC14.03□□□□□ -0.16
LYSMD3Q7Z3D4 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
LYSMD3Q7Z3D4 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LYSMD3Q7Z3D4 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC14.03□□□□□ -0.16
LYSMD3Q7Z3D4 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
LYSMD3Q7Z3D4 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC14.03□□□□□ -0.16
LYSMD3Q7Z3D4 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LYSMD3Q7Z3D4 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC14.03□□□□□ -0.16
LYSMD3Q7Z3D4 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LYSMD3Q7Z3D4 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LYSMD3Q7Z3D4 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
LYSMD3Q7Z3D4 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LYSMD3Q7Z3D4 AC114271.1-201ENST00000612689 2813 ntBASIC14.03□□□□□ -0.16
LYSMD3Q7Z3D4 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
LYSMD3Q7Z3D4 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
LYSMD3Q7Z3D4 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC14.03□□□□□ -0.16
LYSMD3Q7Z3D4 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.16
LYSMD3Q7Z3D4 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
LYSMD3Q7Z3D4 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
LYSMD3Q7Z3D4 STX3-207ENST00000633708 3111 ntTSL 5 BASIC14.02□□□□□ -0.16
LYSMD3Q7Z3D4 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LYSMD3Q7Z3D4 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
LYSMD3Q7Z3D4 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC14.02□□□□□ -0.16
LYSMD3Q7Z3D4 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
LYSMD3Q7Z3D4 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
LYSMD3Q7Z3D4 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC14.02□□□□□ -0.16
LYSMD3Q7Z3D4 BEND3P3-201ENST00000611030 2440 ntBASIC14.02□□□□□ -0.16
LYSMD3Q7Z3D4 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
LYSMD3Q7Z3D4 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
LYSMD3Q7Z3D4 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC14.02□□□□□ -0.16
LYSMD3Q7Z3D4 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
LYSMD3Q7Z3D4 AC006372.4-201ENST00000624122 1543 ntBASIC14.02□□□□□ -0.16
LYSMD3Q7Z3D4 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC14.02□□□□□ -0.16
LYSMD3Q7Z3D4 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
LYSMD3Q7Z3D4 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
LYSMD3Q7Z3D4 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
LYSMD3Q7Z3D4 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LYSMD3Q7Z3D4 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
LYSMD3Q7Z3D4 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
LYSMD3Q7Z3D4 LINC00265-2P-201ENST00000413372 782 ntBASIC14.02□□□□□ -0.17
LYSMD3Q7Z3D4 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC14.02□□□□□ -0.17
LYSMD3Q7Z3D4 AL592076.1-201ENST00000424448 303 ntBASIC14.02□□□□□ -0.17
LYSMD3Q7Z3D4 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
LYSMD3Q7Z3D4 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LYSMD3Q7Z3D4 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC14.02□□□□□ -0.17
LYSMD3Q7Z3D4 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC14.02□□□□□ -0.17
LYSMD3Q7Z3D4 SIGLEC22P-201ENST00000599104 714 ntBASIC14.02□□□□□ -0.17
LYSMD3Q7Z3D4 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC14.02□□□□□ -0.17
LYSMD3Q7Z3D4 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
LYSMD3Q7Z3D4 AL139424.3-202ENST00000641619 917 ntBASIC14.02□□□□□ -0.17
LYSMD3Q7Z3D4 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LYSMD3Q7Z3D4 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
LYSMD3Q7Z3D4 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC14.02□□□□□ -0.17
LYSMD3Q7Z3D4 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC14.02□□□□□ -0.17
LYSMD3Q7Z3D4 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
LYSMD3Q7Z3D4 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
LYSMD3Q7Z3D4 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC14.02□□□□□ -0.17
LYSMD3Q7Z3D4 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
LYSMD3Q7Z3D4 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LYSMD3Q7Z3D4 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LYSMD3Q7Z3D4 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC14.02□□□□□ -0.17
LYSMD3Q7Z3D4 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
LYSMD3Q7Z3D4 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LYSMD3Q7Z3D4 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
LYSMD3Q7Z3D4 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LYSMD3Q7Z3D4 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LYSMD3Q7Z3D4 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
LYSMD3Q7Z3D4 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
LYSMD3Q7Z3D4 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC14.02□□□□□ -0.17
LYSMD3Q7Z3D4 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LYSMD3Q7Z3D4 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LYSMD3Q7Z3D4 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LYSMD3Q7Z3D4 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LYSMD3Q7Z3D4 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LYSMD3Q7Z3D4 AC092053.3-201ENST00000641308 4975 ntBASIC14.01□□□□□ -0.17
LYSMD3Q7Z3D4 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
LYSMD3Q7Z3D4 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC14.01□□□□□ -0.17
LYSMD3Q7Z3D4 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC14.01□□□□□ -0.17
LYSMD3Q7Z3D4 CTBP1-AS2-206ENST00000581398 5652 ntBASIC14.01□□□□□ -0.17
LYSMD3Q7Z3D4 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC14.01□□□□□ -0.17
LYSMD3Q7Z3D4 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LYSMD3Q7Z3D4 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
LYSMD3Q7Z3D4 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
LYSMD3Q7Z3D4 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
LYSMD3Q7Z3D4 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LYSMD3Q7Z3D4 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LYSMD3Q7Z3D4 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LYSMD3Q7Z3D4 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LYSMD3Q7Z3D4 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LYSMD3Q7Z3D4 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC14.01□□□□□ -0.17
LYSMD3Q7Z3D4 HINT2P1-201ENST00000419438 481 ntBASIC14.01□□□□□ -0.17
LYSMD3Q7Z3D4 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LYSMD3Q7Z3D4 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
LYSMD3Q7Z3D4 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms