Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 SULT1A3-202ENST00000395138 1326 ntAPPRIS P2 TSL 1 (best) BASIC8.89□□□□□ -0.99
VPS13DQ5THJ4 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC8.89□□□□□ -0.99
VPS13DQ5THJ4 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
VPS13DQ5THJ4 SLURP1-201ENST00000246515 537 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
VPS13DQ5THJ4 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC8.89□□□□□ -0.99
VPS13DQ5THJ4 HNRNPA1P55-201ENST00000505935 955 ntBASIC8.89□□□□□ -0.99
VPS13DQ5THJ4 AC025048.4-201ENST00000589740 699 ntTSL 3 BASIC8.89□□□□□ -0.99
VPS13DQ5THJ4 PDLIM1P1-201ENST00000604187 969 ntBASIC8.89□□□□□ -0.99
VPS13DQ5THJ4 AC116036.2-201ENST00000607592 462 ntBASIC8.89□□□□□ -0.99
VPS13DQ5THJ4 PDZRN3-AS1-203ENST00000608743 780 ntTSL 5 BASIC8.89□□□□□ -0.99
VPS13DQ5THJ4 AC010503.4-201ENST00000615487 688 ntBASIC8.89□□□□□ -0.99
VPS13DQ5THJ4 AC097634.2-201ENST00000615819 604 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
VPS13DQ5THJ4 GMEB1-201ENST00000294409 1912 ntAPPRIS P4 TSL 1 (best) BASIC8.89□□□□□ -0.99
VPS13DQ5THJ4 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
VPS13DQ5THJ4 SLC5A11-211ENST00000569071 1919 ntTSL 5 BASIC8.89□□□□□ -0.99
VPS13DQ5THJ4 POTEC-201ENST00000358970 1629 ntAPPRIS P2 TSL 1 (best) BASIC8.89□□□□□ -0.99
VPS13DQ5THJ4 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
VPS13DQ5THJ4 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC8.89□□□□□ -0.99
VPS13DQ5THJ4 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC8.89□□□□□ -0.99
VPS13DQ5THJ4 SDR16C5-203ENST00000522671 1988 ntTSL 2 BASIC8.89□□□□□ -0.99
VPS13DQ5THJ4 AL591368.1-201ENST00000437181 1449 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
VPS13DQ5THJ4 Z97653.2-201ENST00000623057 1418 ntBASIC8.89□□□□□ -0.99
VPS13DQ5THJ4 BEND3P1-201ENST00000421591 1944 ntBASIC8.89□□□□□ -0.99
VPS13DQ5THJ4 AC073465.1-201ENST00000456671 464 ntBASIC8.89□□□□□ -0.99
VPS13DQ5THJ4 C8orf37-AS1-203ENST00000521905 617 ntTSL 5 BASIC8.89□□□□□ -0.99
VPS13DQ5THJ4 AC080023.2-201ENST00000532615 208 ntBASIC8.89□□□□□ -0.99
VPS13DQ5THJ4 MRPL51-205ENST00000543164 814 ntTSL 2 BASIC8.89□□□□□ -0.99
VPS13DQ5THJ4 MRPL51-206ENST00000543703 441 ntTSL 3 BASIC8.89□□□□□ -0.99
VPS13DQ5THJ4 AL391832.3-201ENST00000549744 846 ntTSL 3 BASIC8.89□□□□□ -0.99
VPS13DQ5THJ4 AC005154.1-227ENST00000579174 755 ntTSL 3 BASIC8.89□□□□□ -0.99
VPS13DQ5THJ4 RN7SL5P-201ENST00000581458 321 ntBASIC8.89□□□□□ -0.99
VPS13DQ5THJ4 PSME3-213ENST00000592169 826 ntTSL 3 BASIC8.89□□□□□ -0.99
VPS13DQ5THJ4 PLA2G4C-AS1-203ENST00000601950 454 ntTSL 3 BASIC8.89□□□□□ -0.99
VPS13DQ5THJ4 AC004832.1-204ENST00000610737 1018 ntTSL 5 BASIC8.89□□□□□ -0.99
VPS13DQ5THJ4 LINC00923-208ENST00000621777 503 ntTSL 5 BASIC8.89□□□□□ -0.99
VPS13DQ5THJ4 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC8.89□□□□□ -0.99
VPS13DQ5THJ4 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
VPS13DQ5THJ4 LAMP2-201ENST00000200639 1867 ntAPPRIS P5 TSL 1 (best) BASIC8.89□□□□□ -0.99
VPS13DQ5THJ4 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
VPS13DQ5THJ4 SERPINB8-209ENST00000636430 1719 ntTSL 5 BASIC8.89□□□□□ -0.99
VPS13DQ5THJ4 DRD2-204ENST00000538967 1493 ntAPPRIS ALT1 TSL 5 BASIC8.89□□□□□ -0.99
VPS13DQ5THJ4 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
VPS13DQ5THJ4 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
VPS13DQ5THJ4 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
VPS13DQ5THJ4 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
VPS13DQ5THJ4 ZC3H8-201ENST00000272570 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
VPS13DQ5THJ4 NDUFB11-201ENST00000276062 948 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
VPS13DQ5THJ4 OAZ3-202ENST00000400999 890 ntAPPRIS ALT2 TSL 5 BASIC8.89□□□□□ -0.99
VPS13DQ5THJ4 DHRSX-IT1-201ENST00000437244 651 ntTSL 5 BASIC8.89□□□□□ -0.99
VPS13DQ5THJ4 FAM213AP2-201ENST00000521579 683 ntBASIC8.89□□□□□ -0.99
VPS13DQ5THJ4 MEG3-214ENST00000519709 1726 ntTSL 5 BASIC8.89□□□□□ -0.99
VPS13DQ5THJ4 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC8.89□□□□□ -0.99
VPS13DQ5THJ4 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC8.88□□□□□ -0.99
VPS13DQ5THJ4 JAML-202ENST00000356289 1944 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
VPS13DQ5THJ4 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
VPS13DQ5THJ4 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
VPS13DQ5THJ4 FKBP4P1-201ENST00000507284 1347 ntBASIC8.88□□□□□ -0.99
VPS13DQ5THJ4 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC8.88□□□□□ -0.99
VPS13DQ5THJ4 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC8.88□□□□□ -0.99
VPS13DQ5THJ4 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
VPS13DQ5THJ4 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
VPS13DQ5THJ4 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC8.88□□□□□ -0.99
VPS13DQ5THJ4 COA6-201ENST00000366612 1013 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
VPS13DQ5THJ4 PARVG-208ENST00000466375 820 ntTSL 2 BASIC8.88□□□□□ -0.99
VPS13DQ5THJ4 MNAT1-202ENST00000539616 1220 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
VPS13DQ5THJ4 AC008555.6-201ENST00000605047 458 ntTSL 2 BASIC8.88□□□□□ -0.99
VPS13DQ5THJ4 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC8.88□□□□□ -0.99
VPS13DQ5THJ4 GDAP2-201ENST00000369442 2436 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
VPS13DQ5THJ4 AC025538.1-201ENST00000510707 1486 ntBASIC8.88□□□□□ -0.99
VPS13DQ5THJ4 DNPEP-220ENST00000523282 1662 ntAPPRIS ALT2 TSL 2 BASIC8.88□□□□□ -0.99
VPS13DQ5THJ4 ZNF684-203ENST00000372699 2097 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
VPS13DQ5THJ4 HDGF-203ENST00000368209 2171 ntTSL 2 BASIC8.88□□□□□ -0.99
VPS13DQ5THJ4 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC8.88□□□□□ -0.99
VPS13DQ5THJ4 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC8.88□□□□□ -0.99
VPS13DQ5THJ4 PTAFR-201ENST00000305392 1539 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
VPS13DQ5THJ4 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC8.88□□□□□ -0.99
VPS13DQ5THJ4 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC8.88□□□□□ -0.99
VPS13DQ5THJ4 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
VPS13DQ5THJ4 NDUFAF6-201ENST00000396111 1869 ntTSL 5 BASIC8.88□□□□□ -0.99
VPS13DQ5THJ4 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC8.88□□□□□ -0.99
VPS13DQ5THJ4 AC090587.1-201ENST00000415809 494 ntTSL 3 BASIC8.88□□□□□ -0.99
VPS13DQ5THJ4 AL606970.2-201ENST00000434596 470 ntTSL 3 BASIC8.88□□□□□ -0.99
VPS13DQ5THJ4 SEMA6A-AS1-206ENST00000514214 782 ntTSL 3 BASIC8.88□□□□□ -0.99
VPS13DQ5THJ4 AC117834.1-201ENST00000523197 602 ntTSL 4 BASIC8.88□□□□□ -0.99
VPS13DQ5THJ4 AC127496.3-201ENST00000576032 494 ntTSL 3 BASIC8.88□□□□□ -0.99
VPS13DQ5THJ4 CGREF1-209ENST00000640154 336 ntTSL 5 BASIC8.88□□□□□ -0.99
VPS13DQ5THJ4 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC8.88□□□□□ -0.99
VPS13DQ5THJ4 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
VPS13DQ5THJ4 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC8.88□□□□□ -0.99
VPS13DQ5THJ4 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC8.88□□□□□ -0.99
VPS13DQ5THJ4 ABCD1P2-201ENST00000429313 1601 ntBASIC8.88□□□□□ -0.99
VPS13DQ5THJ4 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
VPS13DQ5THJ4 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC8.88□□□□□ -0.99
VPS13DQ5THJ4 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
VPS13DQ5THJ4 ORC5-203ENST00000447452 1409 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
VPS13DQ5THJ4 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
VPS13DQ5THJ4 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
VPS13DQ5THJ4 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC8.88□□□□□ -0.99
VPS13DQ5THJ4 LINC00943-204ENST00000537374 1688 ntTSL 5 BASIC8.88□□□□□ -0.99
VPS13DQ5THJ4 TGM5-207ENST00000622115 2202 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms