Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 TCL1A-201ENST00000402399 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM71Q2Q1W2 LILRP2-202ENST00000413572 1383 ntBASIC14.98□□□□□ -0.01
TRIM71Q2Q1W2 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC14.97□□□□□ -0.01
TRIM71Q2Q1W2 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM71Q2Q1W2 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM71Q2Q1W2 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM71Q2Q1W2 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM71Q2Q1W2 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
TRIM71Q2Q1W2 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM71Q2Q1W2 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC14.97□□□□□ -0.01
TRIM71Q2Q1W2 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC14.97□□□□□ -0.01
TRIM71Q2Q1W2 STK16-202ENST00000409260 1493 ntTSL 5 BASIC14.97□□□□□ -0.01
TRIM71Q2Q1W2 KRT8P25-201ENST00000473150 1456 ntBASIC14.97□□□□□ -0.01
TRIM71Q2Q1W2 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM71Q2Q1W2 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM71Q2Q1W2 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM71Q2Q1W2 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC14.97□□□□□ -0.01
TRIM71Q2Q1W2 SLC12A9-AS1-201ENST00000412754 369 ntTSL 3 BASIC14.97□□□□□ -0.01
TRIM71Q2Q1W2 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM71Q2Q1W2 FRGCA-201ENST00000424933 422 ntTSL 3 BASIC14.97□□□□□ -0.01
TRIM71Q2Q1W2 AL121987.1-201ENST00000435580 645 ntTSL 3 BASIC14.97□□□□□ -0.01
TRIM71Q2Q1W2 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM71Q2Q1W2 AL662797.1-201ENST00000442852 799 ntTSL 3 BASIC14.97□□□□□ -0.01
TRIM71Q2Q1W2 KRT19P4-201ENST00000443208 943 ntBASIC14.97□□□□□ -0.01
TRIM71Q2Q1W2 HNRNPA1P10-201ENST00000444945 962 ntBASIC14.97□□□□□ -0.01
TRIM71Q2Q1W2 AC004540.1-204ENST00000449537 727 ntTSL 2 BASIC14.97□□□□□ -0.01
TRIM71Q2Q1W2 AC019118.1-201ENST00000454530 435 ntTSL 3 BASIC14.97□□□□□ -0.01
TRIM71Q2Q1W2 C3orf38-204ENST00000486971 1259 ntTSL 2 BASIC14.97□□□□□ -0.01
TRIM71Q2Q1W2 AC147876.1-201ENST00000504408 322 ntBASIC14.97□□□□□ -0.01
TRIM71Q2Q1W2 ACY3-202ENST00000529256 933 ntTSL 3 BASIC14.97□□□□□ -0.01
TRIM71Q2Q1W2 AC011489.1-201ENST00000586744 690 ntTSL 3 BASIC14.97□□□□□ -0.01
TRIM71Q2Q1W2 SELENOW-202ENST00000593892 550 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
TRIM71Q2Q1W2 LINC02333-201ENST00000603464 852 ntTSL 3 BASIC14.97□□□□□ -0.01
TRIM71Q2Q1W2 AC123912.6-201ENST00000612657 315 ntBASIC14.97□□□□□ -0.01
TRIM71Q2Q1W2 DNAJC10-211ENST00000640034 888 ntTSL 5 BASIC14.97□□□□□ -0.01
TRIM71Q2Q1W2 NR1H4-203ENST00000392986 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM71Q2Q1W2 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
TRIM71Q2Q1W2 ZNRF4-201ENST00000222033 1426 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
TRIM71Q2Q1W2 AC245140.2-201ENST00000624054 1939 ntBASIC14.97□□□□□ -0.01
TRIM71Q2Q1W2 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
TRIM71Q2Q1W2 LINC00552-201ENST00000625151 2579 ntBASIC14.97□□□□□ -0.01
TRIM71Q2Q1W2 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM71Q2Q1W2 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC14.97□□□□□ -0.01
TRIM71Q2Q1W2 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.97□□□□□ -0.01
TRIM71Q2Q1W2 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
TRIM71Q2Q1W2 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM71Q2Q1W2 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
TRIM71Q2Q1W2 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM71Q2Q1W2 LINC00205-201ENST00000433465 1391 ntTSL 3 BASIC14.97□□□□□ -0.01
TRIM71Q2Q1W2 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM71Q2Q1W2 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRIM71Q2Q1W2 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRIM71Q2Q1W2 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC14.96□□□□□ -0.01
TRIM71Q2Q1W2 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14.96□□□□□ -0.01
TRIM71Q2Q1W2 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
TRIM71Q2Q1W2 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRIM71Q2Q1W2 PROZ-201ENST00000342783 1551 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRIM71Q2Q1W2 SPATA21-202ENST00000375577 1136 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TRIM71Q2Q1W2 AL359649.1-202ENST00000375713 443 ntTSL 5 BASIC14.96□□□□□ -0.01
TRIM71Q2Q1W2 SH3BGR-202ENST00000380631 780 ntTSL 5 BASIC14.96□□□□□ -0.01
TRIM71Q2Q1W2 CPSF4L-202ENST00000397671 1275 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
TRIM71Q2Q1W2 CDRT15L2-201ENST00000399044 1048 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
TRIM71Q2Q1W2 EEF1DP5-201ENST00000431410 772 ntBASIC14.96□□□□□ -0.01
TRIM71Q2Q1W2 CDK2-203ENST00000440311 1031 ntTSL 2 BASIC14.96□□□□□ -0.01
TRIM71Q2Q1W2 RPSAP69-201ENST00000445739 546 ntTSL 4 BASIC14.96□□□□□ -0.01
TRIM71Q2Q1W2 AL021391.1-201ENST00000454439 545 ntTSL 4 BASIC14.96□□□□□ -0.01
TRIM71Q2Q1W2 AC098820.2-201ENST00000457694 666 ntTSL 5 BASIC14.96□□□□□ -0.01
TRIM71Q2Q1W2 AC137579.2-201ENST00000517714 551 ntTSL 4 BASIC14.96□□□□□ -0.01
TRIM71Q2Q1W2 OR4A49P-201ENST00000527050 632 ntBASIC14.96□□□□□ -0.01
TRIM71Q2Q1W2 LINC00514-203ENST00000573465 313 ntTSL 5 BASIC14.96□□□□□ -0.01
TRIM71Q2Q1W2 MED11-202ENST00000573708 802 ntTSL 2 BASIC14.96□□□□□ -0.01
TRIM71Q2Q1W2 AP005899.1-201ENST00000579467 544 ntTSL 3 BASIC14.96□□□□□ -0.01
TRIM71Q2Q1W2 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC14.96□□□□□ -0.01
TRIM71Q2Q1W2 AC016582.2-202ENST00000587765 1094 ntBASIC14.96□□□□□ -0.01
TRIM71Q2Q1W2 Metazoa_SRP.63-201ENST00000617144 298 ntBASIC14.96□□□□□ -0.01
TRIM71Q2Q1W2 MIR6816-201ENST00000620368 66 ntBASIC14.96□□□□□ -0.01
TRIM71Q2Q1W2 TRO-225ENST00000622017 1403 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
TRIM71Q2Q1W2 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRIM71Q2Q1W2 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.01
TRIM71Q2Q1W2 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
TRIM71Q2Q1W2 JPT1-202ENST00000356033 1519 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
TRIM71Q2Q1W2 F10-201ENST00000375551 1509 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
TRIM71Q2Q1W2 LINC00675-202ENST00000581851 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
TRIM71Q2Q1W2 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
TRIM71Q2Q1W2 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
TRIM71Q2Q1W2 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
TRIM71Q2Q1W2 AL928654.5-201ENST00000624831 2501 ntBASIC14.96□□□□□ -0.02
TRIM71Q2Q1W2 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
TRIM71Q2Q1W2 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
TRIM71Q2Q1W2 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
TRIM71Q2Q1W2 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRIM71Q2Q1W2 GPR45-201ENST00000258456 1307 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
TRIM71Q2Q1W2 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
TRIM71Q2Q1W2 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRIM71Q2Q1W2 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC14.95□□□□□ -0.02
TRIM71Q2Q1W2 EML1-203ENST00000334192 4064 ntTSL 5 BASIC14.95□□□□□ -0.02
TRIM71Q2Q1W2 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
TRIM71Q2Q1W2 AL157996.1-201ENST00000624684 2299 ntBASIC14.95□□□□□ -0.02
TRIM71Q2Q1W2 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
TRIM71Q2Q1W2 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms