Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 ESRRAP2-203ENST00000453309 822 ntTSL 5 BASIC13.16□□□□□ -0.3
RAE1P78406 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC13.16□□□□□ -0.3
RAE1P78406 HOXB-AS3-209ENST00000477144 743 ntTSL 5 BASIC13.16□□□□□ -0.3
RAE1P78406 RN7SL258P-201ENST00000478664 300 ntBASIC13.16□□□□□ -0.3
RAE1P78406 RPL18AP8-201ENST00000486071 528 ntBASIC13.16□□□□□ -0.3
RAE1P78406 AC008723.1-201ENST00000506922 207 ntBASIC13.16□□□□□ -0.3
RAE1P78406 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
RAE1P78406 COQ10BP2-201ENST00000513804 724 ntBASIC13.16□□□□□ -0.3
RAE1P78406 AC024681.1-201ENST00000521917 487 ntBASIC13.16□□□□□ -0.3
RAE1P78406 ADSSL1-208ENST00000555674 520 ntTSL 3 BASIC13.16□□□□□ -0.3
RAE1P78406 AL161670.2-201ENST00000557650 1227 ntBASIC13.16□□□□□ -0.3
RAE1P78406 MIR4754-201ENST00000582477 89 ntBASIC13.16□□□□□ -0.3
RAE1P78406 AC009145.4-201ENST00000625119 1294 ntBASIC13.16□□□□□ -0.3
RAE1P78406 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAE1P78406 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
RAE1P78406 METTL12-203ENST00000532971 2037 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
RAE1P78406 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAE1P78406 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RAE1P78406 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAE1P78406 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC13.16□□□□□ -0.3
RAE1P78406 SRSF1-205ENST00000582730 3117 ntTSL 2 BASIC13.16□□□□□ -0.3
RAE1P78406 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC13.16□□□□□ -0.3
RAE1P78406 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC13.16□□□□□ -0.3
RAE1P78406 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
RAE1P78406 DRD2-210ENST00000544518 2473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAE1P78406 TRGV9-201ENST00000444775 1735 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
RAE1P78406 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC13.16□□□□□ -0.3
RAE1P78406 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
RAE1P78406 ERG-211ENST00000453032 1595 ntTSL 2 BASIC13.15□□□□□ -0.3
RAE1P78406 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC13.15□□□□□ -0.3
RAE1P78406 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC13.15□□□□□ -0.3
RAE1P78406 DHX16-201ENST00000376437 1933 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RAE1P78406 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAE1P78406 ZNF573-204ENST00000392138 2266 ntTSL 2 BASIC13.15□□□□□ -0.3
RAE1P78406 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC13.15□□□□□ -0.3
RAE1P78406 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAE1P78406 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAE1P78406 TRO-225ENST00000622017 1403 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
RAE1P78406 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RAE1P78406 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAE1P78406 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
RAE1P78406 Z82170.1-201ENST00000625081 3192 ntBASIC13.15□□□□□ -0.3
RAE1P78406 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC13.15□□□□□ -0.3
RAE1P78406 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC13.15□□□□□ -0.3
RAE1P78406 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAE1P78406 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAE1P78406 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC13.15□□□□□ -0.3
RAE1P78406 IFT172-203ENST00000416524 1982 ntTSL 2 BASIC13.15□□□□□ -0.3
RAE1P78406 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
RAE1P78406 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC13.15□□□□□ -0.3
RAE1P78406 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAE1P78406 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAE1P78406 MIR557-201ENST00000385239 98 ntBASIC13.15□□□□□ -0.3
RAE1P78406 RPL3P2-204ENST00000413027 1203 ntBASIC13.15□□□□□ -0.3
RAE1P78406 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RAE1P78406 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC13.15□□□□□ -0.3
RAE1P78406 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC13.15□□□□□ -0.3
RAE1P78406 AC006335.1-201ENST00000445200 547 ntBASIC13.15□□□□□ -0.3
RAE1P78406 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC13.15□□□□□ -0.3
RAE1P78406 AC099548.2-209ENST00000480264 625 ntBASIC13.15□□□□□ -0.3
RAE1P78406 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC13.15□□□□□ -0.3
RAE1P78406 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
RAE1P78406 MIR4265-201ENST00000582152 99 ntBASIC13.15□□□□□ -0.3
RAE1P78406 NAT9-220ENST00000582870 896 ntTSL 5 BASIC13.15□□□□□ -0.3
RAE1P78406 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC13.15□□□□□ -0.3
RAE1P78406 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC13.15□□□□□ -0.3
RAE1P78406 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC13.15□□□□□ -0.3
RAE1P78406 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC13.15□□□□□ -0.3
RAE1P78406 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC13.15□□□□□ -0.3
RAE1P78406 Metazoa_SRP.141-201ENST00000615072 282 ntBASIC13.15□□□□□ -0.3
RAE1P78406 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC13.15□□□□□ -0.3
RAE1P78406 CDK7-214ENST00000626796 358 ntTSL 5 BASIC13.15□□□□□ -0.3
RAE1P78406 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC13.15□□□□□ -0.3
RAE1P78406 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
RAE1P78406 SLC39A11-201ENST00000255559 2737 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAE1P78406 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RAE1P78406 RNASE7-201ENST00000298690 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAE1P78406 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAE1P78406 PCDHB18P-202ENST00000526308 3197 ntBASIC13.15□□□□□ -0.3
RAE1P78406 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC13.15□□□□□ -0.3
RAE1P78406 ABCB7-203ENST00000373394 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAE1P78406 NEK3-205ENST00000610828 2396 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAE1P78406 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAE1P78406 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RAE1P78406 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
RAE1P78406 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAE1P78406 SLC35B3-201ENST00000379660 2137 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAE1P78406 LINC01756-201ENST00000417651 2148 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RAE1P78406 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RAE1P78406 SLC6A9-205ENST00000372310 3130 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.31
RAE1P78406 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
RAE1P78406 PDXDC2P-206ENST00000534700 1315 ntBASIC13.14□□□□□ -0.31
RAE1P78406 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RAE1P78406 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
RAE1P78406 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RAE1P78406 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RAE1P78406 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RAE1P78406 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC13.14□□□□□ -0.31
RAE1P78406 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RAE1P78406 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms