Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 SENP5-202ENST00000419026 973 ntTSL 3 BASIC8.84□□□□□ -0.99
PCP4P48539 LINC01426-202ENST00000420877 2632 ntTSL 2 BASIC8.84□□□□□ -0.99
PCP4P48539 DUX4L29-201ENST00000425409 679 ntBASIC8.84□□□□□ -0.99
PCP4P48539 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC8.84□□□□□ -0.99
PCP4P48539 ESRRAP2-203ENST00000453309 822 ntTSL 5 BASIC8.84□□□□□ -0.99
PCP4P48539 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC8.84□□□□□ -0.99
PCP4P48539 LINC01804-203ENST00000492352 1871 ntTSL 2 BASIC8.84□□□□□ -0.99
PCP4P48539 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC8.84□□□□□ -0.99
PCP4P48539 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
PCP4P48539 AC022616.5-201ENST00000518796 181 ntBASIC8.84□□□□□ -0.99
PCP4P48539 PTPRK-221ENST00000532331 5757 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
PCP4P48539 AL359237.1-203ENST00000554519 813 ntTSL 3 BASIC8.84□□□□□ -0.99
PCP4P48539 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
PCP4P48539 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC8.84□□□□□ -0.99
PCP4P48539 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
PCP4P48539 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
PCP4P48539 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC8.84□□□□□ -0.99
PCP4P48539 AC067931.2-201ENST00000623655 2003 ntBASIC8.84□□□□□ -0.99
PCP4P48539 ZNF445-202ENST00000425708 10052 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
PCP4P48539 EMC1-201ENST00000375199 5408 ntAPPRIS ALT1 TSL 1 (best) BASIC8.84□□□□□ -0.99
PCP4P48539 MRAS-210ENST00000614350 4377 ntTSL 2 BASIC8.84□□□□□ -0.99
PCP4P48539 VLDLR-203ENST00000382100 9163 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
PCP4P48539 PPIP5K1-205ENST00000381879 5487 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
PCP4P48539 NCAPD2P1-201ENST00000432906 1801 ntBASIC8.84□□□□□ -0.99
PCP4P48539 DNAH9-201ENST00000262442 13750 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
PCP4P48539 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
PCP4P48539 GAS2L1P2-201ENST00000436355 1356 ntBASIC8.84□□□□□ -0.99
PCP4P48539 FGFR1-209ENST00000397113 3680 ntAPPRIS ALT1 TSL 2 BASIC8.84□□□□□ -0.99
PCP4P48539 PCDHGC4-203ENST00000617094 2793 ntAPPRIS ALT2 BASIC8.84□□□□□ -1
PCP4P48539 LRRFIP2-203ENST00000396428 1791 ntTSL 2 BASIC8.84□□□□□ -1
PCP4P48539 PPP2R2C-204ENST00000506140 1780 ntTSL 2 BASIC8.84□□□□□ -1
PCP4P48539 AC091198.1-201ENST00000591558 2492 ntTSL 5 BASIC8.83□□□□□ -1
PCP4P48539 HMOX2-202ENST00000398595 1644 ntAPPRIS P1 TSL 2 BASIC8.83□□□□□ -1
PCP4P48539 TTLL7-201ENST00000260505 7976 ntAPPRIS P1 TSL 2 BASIC8.83□□□□□ -1
PCP4P48539 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC8.83□□□□□ -1
PCP4P48539 SLC38A1-201ENST00000398637 8066 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
PCP4P48539 PRIMPOL-209ENST00000512834 2174 ntAPPRIS ALT1 TSL 1 (best) BASIC8.83□□□□□ -1
PCP4P48539 FBXO5-201ENST00000229758 2037 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
PCP4P48539 UBA3-203ENST00000415609 2004 ntTSL 5 BASIC8.83□□□□□ -1
PCP4P48539 THRB-AS1-205ENST00000609230 1318 ntTSL 5 BASIC8.83□□□□□ -1
PCP4P48539 NF2-207ENST00000397789 1857 ntAPPRIS ALT1 TSL 1 (best) BASIC8.83□□□□□ -1
PCP4P48539 RPH3A-213ENST00000548866 2429 ntTSL 2 BASIC8.83□□□□□ -1
PCP4P48539 KIF2C-201ENST00000372217 2955 ntTSL 1 (best) BASIC8.83□□□□□ -1
PCP4P48539 TPP1-201ENST00000299427 3536 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
PCP4P48539 RNF40-204ENST00000563683 4063 ntTSL 5 BASIC8.83□□□□□ -1
PCP4P48539 SPIN3-205ENST00000638289 4614 ntAPPRIS P1 BASIC8.83□□□□□ -1
PCP4P48539 TCF7-203ENST00000395023 2815 ntTSL 1 (best) BASIC8.83□□□□□ -1
PCP4P48539 RCBTB1-202ENST00000378302 4033 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
PCP4P48539 LINC02334-201ENST00000617568 4959 ntTSL 1 (best) BASIC8.83□□□□□ -1
PCP4P48539 SH2D4A-204ENST00000519207 1984 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
PCP4P48539 CLIP1-219ENST00000620786 5913 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
PCP4P48539 NSD2-207ENST00000398261 8390 ntTSL 1 (best) BASIC8.83□□□□□ -1
PCP4P48539 ARMCX3-201ENST00000341189 3730 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
PCP4P48539 MTSS1-205ENST00000518547 4944 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
PCP4P48539 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC8.83□□□□□ -1
PCP4P48539 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC8.83□□□□□ -1
PCP4P48539 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC8.83□□□□□ -1
PCP4P48539 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC8.83□□□□□ -1
PCP4P48539 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC8.83□□□□□ -1
PCP4P48539 AC005076.1-201ENST00000433446 769 ntTSL 1 (best) BASIC8.83□□□□□ -1
PCP4P48539 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC8.83□□□□□ -1
PCP4P48539 HNRNPA1P23-201ENST00000491091 1133 ntBASIC8.83□□□□□ -1
PCP4P48539 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC8.83□□□□□ -1
PCP4P48539 AC023043.1-201ENST00000568654 609 ntTSL 1 (best) BASIC8.83□□□□□ -1
PCP4P48539 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC8.83□□□□□ -1
PCP4P48539 ADORA3-204ENST00000632535 1201 ntTSL 3 BASIC8.83□□□□□ -1
PCP4P48539 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC8.83□□□□□ -1
PCP4P48539 LINC01597-201ENST00000380888 4472 ntTSL 5 BASIC8.83□□□□□ -1
PCP4P48539 HDAC8-214ENST00000439122 2338 ntTSL 2 BASIC8.83□□□□□ -1
PCP4P48539 LINC01235-201ENST00000604724 2328 ntTSL 2 BASIC8.83□□□□□ -1
PCP4P48539 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
PCP4P48539 DLGAP5-201ENST00000247191 2973 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
PCP4P48539 PHC1-214ENST00000544916 3626 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
PCP4P48539 COL4A6-203ENST00000394872 6750 ntTSL 5 BASIC8.83□□□□□ -1
PCP4P48539 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
PCP4P48539 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC8.83□□□□□ -1
PCP4P48539 SNHG14-208ENST00000453082 6087 ntTSL 5 BASIC8.83□□□□□ -1
PCP4P48539 SEC16B-201ENST00000308284 3985 ntAPPRIS P2 TSL 1 (best) BASIC8.83□□□□□ -1
PCP4P48539 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC8.83□□□□□ -1
PCP4P48539 TNFAIP3-210ENST00000620204 3817 ntTSL 5 BASIC8.83□□□□□ -1
PCP4P48539 ZNF691-204ENST00000372506 1859 ntAPPRIS P3 TSL 2 BASIC8.83□□□□□ -1
PCP4P48539 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC8.83□□□□□ -1
PCP4P48539 ADD1-206ENST00000398129 3787 ntAPPRIS ALT1 TSL 2 BASIC8.83□□□□□ -1
PCP4P48539 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
PCP4P48539 AC104134.1-201ENST00000413234 1747 ntTSL 1 (best) BASIC8.83□□□□□ -1
PCP4P48539 GPD2-213ENST00000540309 1961 ntTSL 1 (best) BASIC8.82□□□□□ -1
PCP4P48539 ACAD10-201ENST00000313698 3959 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
PCP4P48539 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
PCP4P48539 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC8.82□□□□□ -1
PCP4P48539 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC8.82□□□□□ -1
PCP4P48539 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC8.82□□□□□ -1
PCP4P48539 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC8.82□□□□□ -1
PCP4P48539 AL008729.1-203ENST00000606150 2305 ntTSL 2 BASIC8.82□□□□□ -1
PCP4P48539 TNIK-214ENST00000488470 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
PCP4P48539 ATP7B-204ENST00000400370 3252 ntTSL 1 (best) BASIC8.82□□□□□ -1
PCP4P48539 LCLAT1-202ENST00000319406 2774 ntTSL 2 BASIC8.82□□□□□ -1
PCP4P48539 PAH-215ENST00000553106 4122 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
PCP4P48539 GINS3-201ENST00000318129 2274 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
PCP4P48539 GOLGA8N-201ENST00000448387 5329 ntAPPRIS P2 TSL 5 BASIC8.82□□□□□ -1
PCP4P48539 AMT-256ENST00000638063 1783 ntTSL 5 BASIC8.82□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms