Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
CEACAM3P40198 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CEACAM3P40198 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CEACAM3P40198 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CEACAM3P40198 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CEACAM3P40198 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CEACAM3P40198 KCNIP3-201ENST00000295225 2940 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
CEACAM3P40198 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC11.44□□□□□ -0.58
CEACAM3P40198 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CEACAM3P40198 STARD8-203ENST00000374599 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
CEACAM3P40198 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
CEACAM3P40198 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
CEACAM3P40198 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
CEACAM3P40198 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
CEACAM3P40198 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
CEACAM3P40198 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
CEACAM3P40198 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CEACAM3P40198 TMEM131L-203ENST00000409959 5017 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
CEACAM3P40198 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC11.44□□□□□ -0.58
CEACAM3P40198 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC11.44□□□□□ -0.58
CEACAM3P40198 OPLAH-204ENST00000618853 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CEACAM3P40198 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
CEACAM3P40198 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
CEACAM3P40198 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CEACAM3P40198 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC11.43□□□□□ -0.58
CEACAM3P40198 NCBP1-202ENST00000375147 5178 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CEACAM3P40198 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC11.43□□□□□ -0.58
CEACAM3P40198 CETP-203ENST00000566128 1733 ntTSL 5 BASIC11.43□□□□□ -0.58
CEACAM3P40198 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
CEACAM3P40198 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
CEACAM3P40198 SEMA6D-202ENST00000354744 5931 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
CEACAM3P40198 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
CEACAM3P40198 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
CEACAM3P40198 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CEACAM3P40198 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CEACAM3P40198 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
CEACAM3P40198 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CEACAM3P40198 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
CEACAM3P40198 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
CEACAM3P40198 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CEACAM3P40198 USP40-201ENST00000251722 5692 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
CEACAM3P40198 AJAP1-202ENST00000378191 11666 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CEACAM3P40198 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CEACAM3P40198 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
CEACAM3P40198 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CEACAM3P40198 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC11.43□□□□□ -0.58
CEACAM3P40198 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CEACAM3P40198 LINC00265-2P-201ENST00000413372 782 ntBASIC11.43□□□□□ -0.58
CEACAM3P40198 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
CEACAM3P40198 AC116345.2-201ENST00000512837 523 ntBASIC11.43□□□□□ -0.58
CEACAM3P40198 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC11.43□□□□□ -0.58
CEACAM3P40198 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
CEACAM3P40198 AC242376.1-201ENST00000559033 726 ntBASIC11.43□□□□□ -0.58
CEACAM3P40198 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
CEACAM3P40198 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC11.43□□□□□ -0.58
CEACAM3P40198 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC11.43□□□□□ -0.58
CEACAM3P40198 AC026803.1-201ENST00000569130 274 ntBASIC11.43□□□□□ -0.58
CEACAM3P40198 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC11.43□□□□□ -0.58
CEACAM3P40198 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC11.43□□□□□ -0.58
CEACAM3P40198 AC012044.1-201ENST00000603431 297 ntBASIC11.43□□□□□ -0.58
CEACAM3P40198 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC11.43□□□□□ -0.58
CEACAM3P40198 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
CEACAM3P40198 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC11.43□□□□□ -0.58
CEACAM3P40198 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC11.43□□□□□ -0.58
CEACAM3P40198 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC11.43□□□□□ -0.58
CEACAM3P40198 EIF4G1-205ENST00000382330 5129 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
CEACAM3P40198 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
CEACAM3P40198 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CEACAM3P40198 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC11.43□□□□□ -0.58
CEACAM3P40198 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC11.43□□□□□ -0.58
CEACAM3P40198 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
CEACAM3P40198 ZNF646-202ENST00000394979 8118 ntAPPRIS ALT2 BASIC11.43□□□□□ -0.58
CEACAM3P40198 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
CEACAM3P40198 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
CEACAM3P40198 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CEACAM3P40198 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
CEACAM3P40198 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
CEACAM3P40198 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC11.43□□□□□ -0.58
CEACAM3P40198 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CEACAM3P40198 TBC1D3J-201ENST00000620719 1426 ntBASIC11.43□□□□□ -0.58
CEACAM3P40198 CACNB4-210ENST00000539935 8378 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
CEACAM3P40198 MIR34AHG-203ENST00000635687 4211 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
CEACAM3P40198 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CEACAM3P40198 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CEACAM3P40198 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC11.42□□□□□ -0.58
CEACAM3P40198 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
CEACAM3P40198 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
CEACAM3P40198 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CEACAM3P40198 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC11.42□□□□□ -0.58
CEACAM3P40198 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
CEACAM3P40198 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
CEACAM3P40198 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC11.42□□□□□ -0.58
CEACAM3P40198 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
CEACAM3P40198 AL591122.2-201ENST00000624125 1853 ntBASIC11.42□□□□□ -0.58
CEACAM3P40198 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CEACAM3P40198 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
CEACAM3P40198 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CEACAM3P40198 MYO1D-202ENST00000394649 5451 ntTSL 5 BASIC11.42□□□□□ -0.58
CEACAM3P40198 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
CEACAM3P40198 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms