Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC17.28■□□□□ 0.36
COL15A1P39059 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
COL15A1P39059 PTGR1-205ENST00000407693 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
COL15A1P39059 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
COL15A1P39059 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
COL15A1P39059 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
COL15A1P39059 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
COL15A1P39059 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
COL15A1P39059 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC17.28■□□□□ 0.36
COL15A1P39059 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
COL15A1P39059 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
COL15A1P39059 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
COL15A1P39059 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
COL15A1P39059 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
COL15A1P39059 FAM189A2-202ENST00000303068 2051 ntTSL 2 BASIC17.28■□□□□ 0.36
COL15A1P39059 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
COL15A1P39059 NR2C2AP-201ENST00000331552 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
COL15A1P39059 TAC4-203ENST00000352793 564 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
COL15A1P39059 MIR611-201ENST00000384869 67 ntBASIC17.28■□□□□ 0.36
COL15A1P39059 MRPL55-219ENST00000391867 685 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
COL15A1P39059 NR2C2AP-202ENST00000420605 859 ntTSL 2 BASIC17.28■□□□□ 0.36
COL15A1P39059 URB1-AS1-201ENST00000534991 831 ntBASIC17.28■□□□□ 0.36
COL15A1P39059 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
COL15A1P39059 AC019294.2-203ENST00000569596 594 ntTSL 3 BASIC17.28■□□□□ 0.36
COL15A1P39059 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
COL15A1P39059 AC023090.1-201ENST00000592906 502 ntTSL 3 BASIC17.28■□□□□ 0.36
COL15A1P39059 SMIM26-203ENST00000608034 670 ntAPPRIS ALT2 TSL 3 BASIC17.28■□□□□ 0.36
COL15A1P39059 AC005609.5-201ENST00000624712 1053 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
COL15A1P39059 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
COL15A1P39059 SIGLEC6-204ENST00000391797 1391 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
COL15A1P39059 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC17.27■□□□□ 0.36
COL15A1P39059 AC007431.1-201ENST00000578662 1412 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
COL15A1P39059 OASL-202ENST00000339275 1492 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
COL15A1P39059 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
COL15A1P39059 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
COL15A1P39059 AL359881.3-201ENST00000602640 1721 ntBASIC17.27■□□□□ 0.36
COL15A1P39059 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
COL15A1P39059 ETNPPL-202ENST00000411864 2028 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
COL15A1P39059 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
COL15A1P39059 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC17.27■□□□□ 0.35
COL15A1P39059 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
COL15A1P39059 RPLP1-202ENST00000357790 445 ntTSL 2 BASIC17.27■□□□□ 0.35
COL15A1P39059 HDAC8-204ENST00000373560 819 ntTSL 3 BASIC17.27■□□□□ 0.35
COL15A1P39059 AC098657.1-201ENST00000416270 1135 ntBASIC17.27■□□□□ 0.35
COL15A1P39059 AC093495.1-201ENST00000420253 1067 ntTSL 4 BASIC17.27■□□□□ 0.35
COL15A1P39059 AC011284.1-201ENST00000427920 856 ntTSL 4 BASIC17.27■□□□□ 0.35
COL15A1P39059 AL031587.2-201ENST00000445483 414 ntTSL 5 BASIC17.27■□□□□ 0.35
COL15A1P39059 MARK2P17-201ENST00000498560 841 ntBASIC17.27■□□□□ 0.35
COL15A1P39059 GLUD1P3-201ENST00000507952 896 ntTSL 2 BASIC17.27■□□□□ 0.35
COL15A1P39059 HTATIP2-205ENST00000530266 713 ntTSL 3 BASIC17.27■□□□□ 0.35
COL15A1P39059 AL162231.1-205ENST00000544078 338 ntAPPRIS P2 TSL 2 BASIC17.27■□□□□ 0.35
COL15A1P39059 SRRM2-AS1-204ENST00000573802 818 ntTSL 2 BASIC17.27■□□□□ 0.35
COL15A1P39059 SNX11-210ENST00000582104 1282 ntTSL 2 BASIC17.27■□□□□ 0.35
COL15A1P39059 USE1-207ENST00000596136 637 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
COL15A1P39059 TNFRSF10A-204ENST00000613472 978 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
COL15A1P39059 AC009041.4-201ENST00000620075 638 ntBASIC17.27■□□□□ 0.35
COL15A1P39059 CA2-201ENST00000285379 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
COL15A1P39059 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
COL15A1P39059 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC17.26■□□□□ 0.35
COL15A1P39059 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
COL15A1P39059 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
COL15A1P39059 AC005840.4-201ENST00000541242 2494 ntBASIC17.26■□□□□ 0.35
COL15A1P39059 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
COL15A1P39059 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
COL15A1P39059 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC17.26■□□□□ 0.35
COL15A1P39059 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
COL15A1P39059 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
COL15A1P39059 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC17.26■□□□□ 0.35
COL15A1P39059 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC17.26■□□□□ 0.35
COL15A1P39059 CHMP5-202ENST00000419016 1957 ntTSL 2 BASIC17.26■□□□□ 0.35
COL15A1P39059 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC17.26■□□□□ 0.35
COL15A1P39059 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
COL15A1P39059 AL050341.2-201ENST00000567508 1541 ntBASIC17.26■□□□□ 0.35
COL15A1P39059 PSMC5-212ENST00000581882 1474 ntTSL 5 BASIC17.26■□□□□ 0.35
COL15A1P39059 NAAA-203ENST00000505594 1425 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
COL15A1P39059 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
COL15A1P39059 CSHL1-201ENST00000259003 739 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
COL15A1P39059 PDCD6-201ENST00000264933 1135 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
COL15A1P39059 SFT2D2-202ENST00000367829 491 ntTSL 5 BASIC17.26■□□□□ 0.35
COL15A1P39059 TOMM5-203ENST00000401811 789 ntTSL 2 BASIC17.26■□□□□ 0.35
COL15A1P39059 PPIL3-205ENST00000409449 756 ntTSL 5 BASIC17.26■□□□□ 0.35
COL15A1P39059 LINC02026-202ENST00000414309 772 ntTSL 3 BASIC17.26■□□□□ 0.35
COL15A1P39059 ATXN8OS-202ENST00000424524 1236 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
COL15A1P39059 MAGEA7P-201ENST00000436482 942 ntBASIC17.26■□□□□ 0.35
COL15A1P39059 CSHL1-206ENST00000450719 973 ntTSL 2 BASIC17.26■□□□□ 0.35
COL15A1P39059 AC087071.1-201ENST00000469264 427 ntTSL 2 BASIC17.26■□□□□ 0.35
COL15A1P39059 AC092910.2-201ENST00000491262 348 ntBASIC17.26■□□□□ 0.35
COL15A1P39059 SNHG4-204ENST00000507197 865 ntTSL 2 BASIC17.26■□□□□ 0.35
COL15A1P39059 AC087442.1-201ENST00000525563 249 ntTSL 2 BASIC17.26■□□□□ 0.35
COL15A1P39059 DHDDS-217ENST00000526219 1072 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
COL15A1P39059 AL161668.2-201ENST00000531638 492 ntTSL 5 BASIC17.26■□□□□ 0.35
COL15A1P39059 YWHAE-212ENST00000575977 540 ntTSL 2 BASIC17.26■□□□□ 0.35
COL15A1P39059 RN7SL480P-201ENST00000581481 294 ntBASIC17.26■□□□□ 0.35
COL15A1P39059 PRKACA-208ENST00000589994 1127 ntTSL 2 BASIC17.26■□□□□ 0.35
COL15A1P39059 IRF3-213ENST00000596765 710 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
COL15A1P39059 ZNF671-203ENST00000596939 977 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
COL15A1P39059 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC17.26■□□□□ 0.35
COL15A1P39059 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
COL15A1P39059 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
COL15A1P39059 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms