Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CDH3P22223 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
CDH3P22223 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDH3P22223 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC13.76□□□□□ -0.21
CDH3P22223 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC13.76□□□□□ -0.21
CDH3P22223 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CDH3P22223 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDH3P22223 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC13.76□□□□□ -0.21
CDH3P22223 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
CDH3P22223 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDH3P22223 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CDH3P22223 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
CDH3P22223 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC13.76□□□□□ -0.21
CDH3P22223 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDH3P22223 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDH3P22223 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CDH3P22223 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CDH3P22223 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC13.76□□□□□ -0.21
CDH3P22223 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CDH3P22223 ALG1L13P-202ENST00000519320 584 ntBASIC13.76□□□□□ -0.21
CDH3P22223 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CDH3P22223 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC13.76□□□□□ -0.21
CDH3P22223 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC13.76□□□□□ -0.21
CDH3P22223 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC13.76□□□□□ -0.21
CDH3P22223 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC13.76□□□□□ -0.21
CDH3P22223 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
CDH3P22223 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC13.76□□□□□ -0.21
CDH3P22223 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
CDH3P22223 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC13.76□□□□□ -0.21
CDH3P22223 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
CDH3P22223 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDH3P22223 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDH3P22223 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
CDH3P22223 BAIAP2-202ENST00000321300 2879 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDH3P22223 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CDH3P22223 BRD7P5-201ENST00000299197 1822 ntBASIC13.76□□□□□ -0.21
CDH3P22223 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDH3P22223 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
CDH3P22223 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDH3P22223 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDH3P22223 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC13.75□□□□□ -0.21
CDH3P22223 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDH3P22223 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CDH3P22223 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
CDH3P22223 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDH3P22223 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDH3P22223 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CDH3P22223 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC13.75□□□□□ -0.21
CDH3P22223 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
CDH3P22223 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC13.75□□□□□ -0.21
CDH3P22223 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDH3P22223 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
CDH3P22223 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC13.75□□□□□ -0.21
CDH3P22223 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CDH3P22223 AC092506.1-202ENST00000401022 528 ntBASIC13.75□□□□□ -0.21
CDH3P22223 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC13.75□□□□□ -0.21
CDH3P22223 AL807761.2-201ENST00000422849 729 ntBASIC13.75□□□□□ -0.21
CDH3P22223 FTLP1-201ENST00000449155 526 ntBASIC13.75□□□□□ -0.21
CDH3P22223 AC019193.1-201ENST00000506678 823 ntBASIC13.75□□□□□ -0.21
CDH3P22223 AC114947.1-202ENST00000514136 344 ntBASIC13.75□□□□□ -0.21
CDH3P22223 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC13.75□□□□□ -0.21
CDH3P22223 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC13.75□□□□□ -0.21
CDH3P22223 PRKXP1-201ENST00000561423 1122 ntBASIC13.75□□□□□ -0.21
CDH3P22223 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC13.75□□□□□ -0.21
CDH3P22223 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC13.75□□□□□ -0.21
CDH3P22223 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC13.75□□□□□ -0.21
CDH3P22223 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC13.75□□□□□ -0.21
CDH3P22223 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC13.75□□□□□ -0.21
CDH3P22223 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC13.75□□□□□ -0.21
CDH3P22223 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC13.75□□□□□ -0.21
CDH3P22223 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC13.75□□□□□ -0.21
CDH3P22223 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC13.75□□□□□ -0.21
CDH3P22223 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC13.75□□□□□ -0.21
CDH3P22223 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC13.75□□□□□ -0.21
CDH3P22223 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
CDH3P22223 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC13.75□□□□□ -0.21
CDH3P22223 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDH3P22223 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDH3P22223 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC13.75□□□□□ -0.21
CDH3P22223 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDH3P22223 AC012617.1-204ENST00000586340 2305 ntBASIC13.75□□□□□ -0.21
CDH3P22223 MARK2P16-201ENST00000605714 1723 ntBASIC13.75□□□□□ -0.21
CDH3P22223 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
CDH3P22223 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
CDH3P22223 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC13.75□□□□□ -0.21
CDH3P22223 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDH3P22223 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDH3P22223 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC13.75□□□□□ -0.21
CDH3P22223 DPP10-201ENST00000310323 3052 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDH3P22223 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC13.74□□□□□ -0.21
CDH3P22223 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDH3P22223 AC068760.1-201ENST00000493579 1953 ntBASIC13.74□□□□□ -0.21
CDH3P22223 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDH3P22223 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDH3P22223 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDH3P22223 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC13.74□□□□□ -0.21
CDH3P22223 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDH3P22223 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
CDH3P22223 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDH3P22223 KRT8P31-201ENST00000504812 1408 ntBASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms