Protein–RNA interactions for Protein: P20849

COL9A1, Collagen alpha-1(IX) chain, humanhuman

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1P20849 NANOS3-202ENST00000397555 769 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
COL9A1P20849 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC14.23□□□□□ -0.13
COL9A1P20849 MRPS16P3-201ENST00000415961 374 ntBASIC14.23□□□□□ -0.13
COL9A1P20849 DNM1P46-202ENST00000415963 882 ntBASIC14.23□□□□□ -0.13
COL9A1P20849 OR51A6P-201ENST00000418680 1004 ntBASIC14.23□□□□□ -0.13
COL9A1P20849 AC004112.1-201ENST00000431064 561 ntTSL 3 BASIC14.23□□□□□ -0.13
COL9A1P20849 RPS15P5-201ENST00000449885 432 ntBASIC14.23□□□□□ -0.13
COL9A1P20849 NALT1-202ENST00000450304 437 ntTSL 3 BASIC14.23□□□□□ -0.13
COL9A1P20849 GOLGA2-210ENST00000490628 428 ntTSL 2 BASIC14.23□□□□□ -0.13
COL9A1P20849 AC093700.1-201ENST00000503348 717 ntBASIC14.23□□□□□ -0.13
COL9A1P20849 AC100858.1-201ENST00000514059 1228 ntBASIC14.23□□□□□ -0.13
COL9A1P20849 AP001979.1-201ENST00000529222 751 ntBASIC14.23□□□□□ -0.13
COL9A1P20849 AC044839.1-201ENST00000532307 541 ntTSL 5 BASIC14.23□□□□□ -0.13
COL9A1P20849 LINC02207-201ENST00000554530 1256 ntTSL 5 BASIC14.23□□□□□ -0.13
COL9A1P20849 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
COL9A1P20849 MIR4265-201ENST00000582152 99 ntBASIC14.23□□□□□ -0.13
COL9A1P20849 AC010319.2-201ENST00000594663 892 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
COL9A1P20849 AC008982.1-201ENST00000594769 963 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
COL9A1P20849 HPX-213ENST00000615166 826 ntTSL 5 BASIC14.23□□□□□ -0.13
COL9A1P20849 AC005609.1-201ENST00000625195 617 ntTSL 5 BASIC14.23□□□□□ -0.13
COL9A1P20849 PIGA-209ENST00000634582 965 ntTSL 2 BASIC14.23□□□□□ -0.13
COL9A1P20849 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
COL9A1P20849 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
COL9A1P20849 AC023824.1-201ENST00000562945 2975 ntBASIC14.23□□□□□ -0.13
COL9A1P20849 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
COL9A1P20849 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
COL9A1P20849 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
COL9A1P20849 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
COL9A1P20849 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
COL9A1P20849 DRD2-204ENST00000538967 1493 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
COL9A1P20849 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
COL9A1P20849 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
COL9A1P20849 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
COL9A1P20849 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
COL9A1P20849 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC14.23□□□□□ -0.13
COL9A1P20849 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
COL9A1P20849 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
COL9A1P20849 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
COL9A1P20849 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
COL9A1P20849 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
COL9A1P20849 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
COL9A1P20849 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
COL9A1P20849 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
COL9A1P20849 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
COL9A1P20849 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
COL9A1P20849 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
COL9A1P20849 PRL-201ENST00000306482 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
COL9A1P20849 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
COL9A1P20849 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
COL9A1P20849 AL022313.4-201ENST00000562756 2046 ntBASIC14.22□□□□□ -0.13
COL9A1P20849 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
COL9A1P20849 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
COL9A1P20849 PDXDC2P-206ENST00000534700 1315 ntBASIC14.22□□□□□ -0.13
COL9A1P20849 C7orf49-214ENST00000620897 1349 ntTSL 3 BASIC14.22□□□□□ -0.13
COL9A1P20849 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC14.22□□□□□ -0.13
COL9A1P20849 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
COL9A1P20849 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC14.22□□□□□ -0.13
COL9A1P20849 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
COL9A1P20849 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
COL9A1P20849 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
COL9A1P20849 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC14.22□□□□□ -0.13
COL9A1P20849 AC106017.1-201ENST00000428348 440 ntTSL 2 BASIC14.22□□□□□ -0.13
COL9A1P20849 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC14.22□□□□□ -0.13
COL9A1P20849 HSFY7P-201ENST00000432672 318 ntBASIC14.22□□□□□ -0.13
COL9A1P20849 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC14.22□□□□□ -0.13
COL9A1P20849 HSFY8P-201ENST00000437934 318 ntBASIC14.22□□□□□ -0.13
COL9A1P20849 AC007952.3-201ENST00000442355 440 ntTSL 2 BASIC14.22□□□□□ -0.13
COL9A1P20849 KRT18P62-201ENST00000446618 1287 ntBASIC14.22□□□□□ -0.13
COL9A1P20849 PSME2P2-201ENST00000453033 700 ntBASIC14.22□□□□□ -0.13
COL9A1P20849 HSFY5P-201ENST00000453726 309 ntBASIC14.22□□□□□ -0.13
COL9A1P20849 PGAP2-219ENST00000479072 894 ntTSL 3 BASIC14.22□□□□□ -0.13
COL9A1P20849 AC007952.8-202ENST00000495691 440 ntTSL 2 BASIC14.22□□□□□ -0.13
COL9A1P20849 AC138035.2-201ENST00000509192 727 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
COL9A1P20849 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
COL9A1P20849 C3orf84-203ENST00000545770 706 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
COL9A1P20849 AL132994.1-201ENST00000554098 400 ntBASIC14.22□□□□□ -0.13
COL9A1P20849 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC14.22□□□□□ -0.13
COL9A1P20849 AC127002.1-201ENST00000619123 455 ntBASIC14.22□□□□□ -0.13
COL9A1P20849 LINC02193-207ENST00000621799 723 ntTSL 5 BASIC14.22□□□□□ -0.13
COL9A1P20849 AC069287.1-202ENST00000622626 723 ntTSL 5 BASIC14.22□□□□□ -0.13
COL9A1P20849 AC245427.1-201ENST00000633705 760 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
COL9A1P20849 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
COL9A1P20849 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC14.22□□□□□ -0.13
COL9A1P20849 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.22□□□□□ -0.13
COL9A1P20849 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
COL9A1P20849 SARS-202ENST00000369923 1882 ntTSL 5 BASIC14.22□□□□□ -0.13
COL9A1P20849 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
COL9A1P20849 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
COL9A1P20849 PSMC3IP-201ENST00000253789 1408 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
COL9A1P20849 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
COL9A1P20849 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC14.22□□□□□ -0.13
COL9A1P20849 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.22□□□□□ -0.13
COL9A1P20849 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC14.22□□□□□ -0.13
COL9A1P20849 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
COL9A1P20849 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
COL9A1P20849 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
COL9A1P20849 AMT-256ENST00000638063 1783 ntTSL 5 BASIC14.22□□□□□ -0.13
COL9A1P20849 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC14.22□□□□□ -0.13
COL9A1P20849 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
COL9A1P20849 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms