Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC14.17□□□□□ -0.14
NFKB1P19838 AC019294.4-201ENST00000561777 2905 ntBASIC14.17□□□□□ -0.14
NFKB1P19838 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
NFKB1P19838 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NFKB1P19838 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC14.17□□□□□ -0.14
NFKB1P19838 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
NFKB1P19838 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NFKB1P19838 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NFKB1P19838 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NFKB1P19838 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC14.17□□□□□ -0.14
NFKB1P19838 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NFKB1P19838 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NFKB1P19838 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NFKB1P19838 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC14.17□□□□□ -0.14
NFKB1P19838 OR2K2-202ENST00000374428 1038 ntBASIC14.17□□□□□ -0.14
NFKB1P19838 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
NFKB1P19838 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NFKB1P19838 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC14.17□□□□□ -0.14
NFKB1P19838 PPP1R2P4-201ENST00000424051 595 ntBASIC14.17□□□□□ -0.14
NFKB1P19838 AC005722.1-201ENST00000431878 964 ntBASIC14.17□□□□□ -0.14
NFKB1P19838 RN7SL258P-201ENST00000478664 300 ntBASIC14.17□□□□□ -0.14
NFKB1P19838 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
NFKB1P19838 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
NFKB1P19838 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC14.17□□□□□ -0.14
NFKB1P19838 CDK7-214ENST00000626796 358 ntTSL 5 BASIC14.17□□□□□ -0.14
NFKB1P19838 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC14.17□□□□□ -0.14
NFKB1P19838 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC14.17□□□□□ -0.14
NFKB1P19838 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
NFKB1P19838 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
NFKB1P19838 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NFKB1P19838 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
NFKB1P19838 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NFKB1P19838 SIGLECL1-201ENST00000316401 1708 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
NFKB1P19838 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
NFKB1P19838 SERPINA13P-201ENST00000469935 1718 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NFKB1P19838 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NFKB1P19838 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NFKB1P19838 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
NFKB1P19838 CCDC178-201ENST00000300227 3087 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
NFKB1P19838 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NFKB1P19838 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NFKB1P19838 CSF3-204ENST00000394149 1583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
NFKB1P19838 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NFKB1P19838 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
NFKB1P19838 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC14.17□□□□□ -0.14
NFKB1P19838 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
NFKB1P19838 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC14.16□□□□□ -0.14
NFKB1P19838 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NFKB1P19838 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC14.16□□□□□ -0.14
NFKB1P19838 AC138761.6-201ENST00000583997 1423 ntBASIC14.16□□□□□ -0.14
NFKB1P19838 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
NFKB1P19838 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NFKB1P19838 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NFKB1P19838 TMEM78-201ENST00000323223 2175 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
NFKB1P19838 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
NFKB1P19838 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC14.16□□□□□ -0.14
NFKB1P19838 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC14.16□□□□□ -0.14
NFKB1P19838 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
NFKB1P19838 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
NFKB1P19838 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NFKB1P19838 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NFKB1P19838 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NFKB1P19838 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NFKB1P19838 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC14.16□□□□□ -0.14
NFKB1P19838 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NFKB1P19838 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NFKB1P19838 AL583805.1-201ENST00000391389 531 ntBASIC14.16□□□□□ -0.14
NFKB1P19838 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NFKB1P19838 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NFKB1P19838 LINC01114-202ENST00000424321 2112 ntTSL 2 BASIC14.16□□□□□ -0.14
NFKB1P19838 HNRNPA1P2-207ENST00000432375 960 ntBASIC14.16□□□□□ -0.14
NFKB1P19838 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC14.16□□□□□ -0.14
NFKB1P19838 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NFKB1P19838 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC14.16□□□□□ -0.14
NFKB1P19838 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC14.16□□□□□ -0.14
NFKB1P19838 NUP210P1-202ENST00000504322 710 ntBASIC14.16□□□□□ -0.14
NFKB1P19838 AC095040.1-201ENST00000513286 675 ntBASIC14.16□□□□□ -0.14
NFKB1P19838 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
NFKB1P19838 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC14.16□□□□□ -0.14
NFKB1P19838 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NFKB1P19838 NAT9-220ENST00000582870 896 ntTSL 5 BASIC14.16□□□□□ -0.14
NFKB1P19838 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC14.16□□□□□ -0.14
NFKB1P19838 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC14.16□□□□□ -0.14
NFKB1P19838 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC14.16□□□□□ -0.14
NFKB1P19838 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC14.16□□□□□ -0.14
NFKB1P19838 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
NFKB1P19838 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NFKB1P19838 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NFKB1P19838 GK-205ENST00000378946 3638 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NFKB1P19838 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NFKB1P19838 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC14.16□□□□□ -0.14
NFKB1P19838 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC14.16□□□□□ -0.14
NFKB1P19838 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NFKB1P19838 MSNP1-201ENST00000511640 1732 ntBASIC14.15□□□□□ -0.14
NFKB1P19838 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC14.15□□□□□ -0.14
NFKB1P19838 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
NFKB1P19838 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
NFKB1P19838 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
NFKB1P19838 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
NFKB1P19838 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms