Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC12.5□□□□□ -0.41
HLA-DOBP13765 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HLA-DOBP13765 MIR645-201ENST00000385283 94 ntBASIC12.5□□□□□ -0.41
HLA-DOBP13765 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC12.5□□□□□ -0.41
HLA-DOBP13765 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC12.5□□□□□ -0.41
HLA-DOBP13765 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
HLA-DOBP13765 Z97180.1-201ENST00000445173 988 ntBASIC12.5□□□□□ -0.41
HLA-DOBP13765 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC12.5□□□□□ -0.41
HLA-DOBP13765 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC12.5□□□□□ -0.41
HLA-DOBP13765 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
HLA-DOBP13765 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC12.5□□□□□ -0.41
HLA-DOBP13765 CENPX-208ENST00000584347 799 ntTSL 2 BASIC12.5□□□□□ -0.41
HLA-DOBP13765 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC12.5□□□□□ -0.41
HLA-DOBP13765 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC12.5□□□□□ -0.41
HLA-DOBP13765 AL161773.1-201ENST00000624845 863 ntBASIC12.5□□□□□ -0.41
HLA-DOBP13765 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC12.5□□□□□ -0.41
HLA-DOBP13765 AL139424.3-202ENST00000641619 917 ntBASIC12.5□□□□□ -0.41
HLA-DOBP13765 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
HLA-DOBP13765 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC12.5□□□□□ -0.41
HLA-DOBP13765 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC12.5□□□□□ -0.41
HLA-DOBP13765 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HLA-DOBP13765 AC004554.1-201ENST00000422830 1468 ntBASIC12.5□□□□□ -0.41
HLA-DOBP13765 PHB-210ENST00000511832 1509 ntTSL 2 BASIC12.5□□□□□ -0.41
HLA-DOBP13765 AL133338.1-201ENST00000565695 1517 ntBASIC12.5□□□□□ -0.41
HLA-DOBP13765 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HLA-DOBP13765 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
HLA-DOBP13765 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
HLA-DOBP13765 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
HLA-DOBP13765 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
HLA-DOBP13765 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC12.5□□□□□ -0.41
HLA-DOBP13765 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC12.5□□□□□ -0.41
HLA-DOBP13765 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC12.5□□□□□ -0.41
HLA-DOBP13765 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC12.5□□□□□ -0.41
HLA-DOBP13765 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HLA-DOBP13765 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC12.5□□□□□ -0.41
HLA-DOBP13765 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC12.5□□□□□ -0.41
HLA-DOBP13765 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
HLA-DOBP13765 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HLA-DOBP13765 AC019294.4-201ENST00000561777 2905 ntBASIC12.5□□□□□ -0.41
HLA-DOBP13765 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
HLA-DOBP13765 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HLA-DOBP13765 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC12.49□□□□□ -0.41
HLA-DOBP13765 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
HLA-DOBP13765 AC020763.3-201ENST00000625095 2904 ntBASIC12.49□□□□□ -0.41
HLA-DOBP13765 AC004241.5-201ENST00000623870 2448 ntBASIC12.49□□□□□ -0.41
HLA-DOBP13765 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
HLA-DOBP13765 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
HLA-DOBP13765 MARK2P16-201ENST00000605714 1723 ntBASIC12.49□□□□□ -0.41
HLA-DOBP13765 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
HLA-DOBP13765 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HLA-DOBP13765 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HLA-DOBP13765 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
HLA-DOBP13765 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC12.49□□□□□ -0.41
HLA-DOBP13765 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
HLA-DOBP13765 KRT8P18-201ENST00000413425 1445 ntBASIC12.49□□□□□ -0.41
HLA-DOBP13765 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
HLA-DOBP13765 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
HLA-DOBP13765 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
HLA-DOBP13765 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HLA-DOBP13765 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC12.49□□□□□ -0.41
HLA-DOBP13765 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC12.49□□□□□ -0.41
HLA-DOBP13765 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC12.49□□□□□ -0.41
HLA-DOBP13765 DNAJB1P1-201ENST00000429417 1024 ntBASIC12.49□□□□□ -0.41
HLA-DOBP13765 AC026320.2-201ENST00000434379 478 ntBASIC12.49□□□□□ -0.41
HLA-DOBP13765 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC12.49□□□□□ -0.41
HLA-DOBP13765 AC008723.1-201ENST00000506922 207 ntBASIC12.49□□□□□ -0.41
HLA-DOBP13765 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC12.49□□□□□ -0.41
HLA-DOBP13765 ADM-202ENST00000524948 584 ntTSL 2 BASIC12.49□□□□□ -0.41
HLA-DOBP13765 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
HLA-DOBP13765 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
HLA-DOBP13765 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC12.49□□□□□ -0.41
HLA-DOBP13765 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
HLA-DOBP13765 KLF17P1-201ENST00000547105 1126 ntBASIC12.49□□□□□ -0.41
HLA-DOBP13765 AL161670.2-201ENST00000557650 1227 ntBASIC12.49□□□□□ -0.41
HLA-DOBP13765 AC026803.1-201ENST00000569130 274 ntBASIC12.49□□□□□ -0.41
HLA-DOBP13765 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC12.49□□□□□ -0.41
HLA-DOBP13765 MIR6787-201ENST00000616675 61 ntBASIC12.49□□□□□ -0.41
HLA-DOBP13765 AP001505.2-201ENST00000616815 443 ntBASIC12.49□□□□□ -0.41
HLA-DOBP13765 AC015967.2-201ENST00000624092 234 ntBASIC12.49□□□□□ -0.41
HLA-DOBP13765 AC006435.4-201ENST00000625037 234 ntBASIC12.49□□□□□ -0.41
HLA-DOBP13765 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC12.49□□□□□ -0.41
HLA-DOBP13765 AL356737.1-201ENST00000634391 234 ntBASIC12.49□□□□□ -0.41
HLA-DOBP13765 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HLA-DOBP13765 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HLA-DOBP13765 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
HLA-DOBP13765 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
HLA-DOBP13765 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HLA-DOBP13765 AC005252.3-201ENST00000623855 2258 ntBASIC12.49□□□□□ -0.41
HLA-DOBP13765 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HLA-DOBP13765 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC12.49□□□□□ -0.41
HLA-DOBP13765 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HLA-DOBP13765 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
HLA-DOBP13765 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
HLA-DOBP13765 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
HLA-DOBP13765 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
HLA-DOBP13765 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
HLA-DOBP13765 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HLA-DOBP13765 CYFIP2-219ENST00000616178 4210 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
HLA-DOBP13765 Z98885.3-201ENST00000624882 1757 ntBASIC12.48□□□□□ -0.41
HLA-DOBP13765 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms